1WJ9


Conserved Protein Domain Family
CRISPR_assoc

?
pfam08798: CRISPR_assoc 
CRISPR associated protein
This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.
Statistics
?
PSSM-Id: 489894
Aligned: 81 rows
Threshold Bit Score: 102.768
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1WJ9_A           2 WLTKLVLNPASRAA---------RRDLANPYEMHRTLSKAVSRALEEG----RerLLWRLEPArgleppVVLVQTLTEPD 68  Thermus therm...
WP_015931863     4 HLSRLRLRRDP-DVaalahlllpKTEGARVAAGHRLLWSLFADSP-DRa--rD--FLWCEDAGgtwqraTFLILSRRRPQ 77  Methylobacter...
WP_012226053     5 FLSRIALRRDA-PVralarllvpDGEGRQHAAAHHLLWALFGDDP-DRt--rD--FLWRQMEAg-----RFMVLSAREPV 73  Gluconacetoba...
WP_011930721     2 WLSKARLNHDQKAVaalasvlvpEDGSARVAATHHLVWSLFAGDA-DRk--rD--FLWREERPg-----HFLILSPDRPG 71  Acidiphilium
Q2FNT6           2 FFSKMTLDREAAISgr-----frDLVT-GPYQVHEVIWDLFADHP-DRk--rD--FLYRAELTgr--dpVVYLLSARKPV 68  Methanospiril...
WP_012618234     2 qISKIQLNADASDHpa-----fwEHVG-GAYQAHSLIWDLFSDGP-ERe--rD--FLFRQEVHqg--mpVFWTVSERVPS 68  Methanosphaer...
Q314I5           2 WMSKLVLDPRRA-------------VGKNLYDTHRLLWNLFADAP-DRt--rD--FLFR---Eqde-pyTFLTVSRRQPE 59  Desulfovibrio...
WP_014812298     2 YFSRIRLDGERASAae-----ltKMIGQDGYGDHQIIWQLFKCAD-KSe--rD--FLFRKESQqs--lpVFFTVSRTPPA 69  Desulfomonile...
jgi:Mzhil_1557   2 YMTKAEILPDKVFDkd-----vwNKLQ-NTYSIHQLVWSLFSKKP-DDk--rD--FLYRYEFNrn--vpTFYVVSKSIPA 68 
CBK41286         7 WLSRISLRGDVGCKqlvg-mgelDL-----YGQHRALWKLFTVAPEDRteraE--FLFRAERKgs--vpVFYVLSRQQPI 76 
1WJ9_A          69 WSvldeGYAQVFPpKpFHpALKPGQRLRFRLRANPakr-----------------------------laATGKRVAlKTP 119 Thermus therm...
WP_015931863    78 DTr---GLFEIET-KpFApVLAPGQRLGFRLRASPaasdtptavgrrgkr----idpvaralrdlppevRAERRHS-VLQ 148 Methylobacter...
WP_012226053    74 DSh---GLFDVET-RpFDpLLKEGDRLRFLLRANAtvdrktpgrtrsqrh-----dvvmdalhrrsqreGAEARDS-MIA 143 Gluconacetoba...
WP_011930721    72 DGg---GLCTVES-KeFTpALSAGDRLGFSLRANAvvsrgepgsgrgkrh-----dvvmdvlrhhpkgeRASHRLG-LVT 141 Acidiphilium
Q2FNT6          69 YEg---NVWNILS-KpFHpVLQKDDLLNFRIRVNPvvtktepdpdrkrirh--rhdvimdakrrlneanSSFSMSD-LVQ 141 Methanospiril...
WP_012618234    69 DRn---ETWNIKS-KpYApILRQGMHLSFVLRANPirsrrddlgkqhrhdv---vmdmktalkdskpgdQWPAEDQ-IIQ 140 Methanosphaer...
Q314I5          60 DTt---GWWSIQI-KpYApKLQAGDAVAFSLRVNAvvkrnengkqrrfdi----vqdaclrmkelnqnaQMPTRAE-IAQ 130 Desulfovibrio...
WP_014812298    70 RDh---GIFRLKT-KsYDpKVRPGDRFAFSLRANPvvtrwigdnekhharhdvvmdakrklkadsvpesEWPTTPE-IAQ 144 Desulfomonile...
jgi:Mzhil_1557  69 NNl---SYFNIDV-KtYDpKINPGQHFLFSLRANPvvtkrdengkqkrhdv--vmdekyrlqseklnssKLPPISE-IAH 141
CBK41286        77 DRa---GLWHIES-KpYRpVLNEGDRLAFKLRVNPvvtrrtevnkrrkrhdv-vmdakcqlnwnalptdQRPALAD-IVH 150
1WJ9_A         120 AEKVAWLERRLEEGGFrlle-----gergPWVQILQDTFLEVRrKKdgeeAgk-lLQVQAVLFEGRLEVVDPERALATLR 193 Thermus therm...
WP_015931863   149 EVGAGWLARQGARAGFtlcdaeapsgtrqpCLSVDGERWNVLP-R-----EgaapVRFSSLDFEGVLRVEDPSLFLAALA 222 Methylobacter...
WP_012226053   144 DALETWMGRQGVRAGFapa----------spLVIEGRDVLRIP-Rs----GgrgiVSFGVVNLTGEVRVTAPDAFLDSLM 208 Gluconacetoba...
WP_011930721   142 EAGAAWLVRQGERHGFvi----------eGQPACDGYEAIRVL-Rg----RgekpLTFSQIDFAGVLSVTDPARFIAAIG 206 Acidiphilium
Q2FNT6         142 QESVRWLRQRSEKGGFsly---------edRVIAGGYRKMQFS-Qg----RkkntISISVVDCDGVLRVTDPDLFLQMIC 207 Methanospiril...
WP_012618234   141 EAGLVWLANQGNAKGFslq---------dgAVRVDGYTQHRFV-Kp----KkkqmVQISTLDFTGLLTVTDPERFTTALF 206 Methanosphaer...
Q314I5         131 EAGTRWLLARQQALGLsie---------saAILVEGCKVERFV-KRatrdTrsgvVSLGIMDLQGTAEVKDPQLLLQALF 200 Desulfovibrio...
WP_014812298   145 SAGFEWLAAKAEHAGFgvd---------rrLVSVEGYRQHQLR-K-----GknhlIRLSTMDFTGILTVTHPDLFVTALF 209 Desulfomonile...
jgi:Mzhil_1557 142 EKGLEWLNKKGLKNGFtfd---------wrNVRADGYQTHNFK-Kp----KgsgqIKISTLDFDGMIQVTDMESFTNALF 207
CBK41286       151 KAGVTWLQARAERLGCsfl---------edSIRVDGYQTWRQSg------Lk--gIELSTLDFDGILAITDPHRFSAALV 213
1WJ9_A         194 RGVGPGKALGLGLLSVAP 211 Thermus thermophilus
WP_015931863   223 EGFGRAKAFGCGLMLIRP 240 Methylobacterium nodulans
WP_012226053   209 QGFGRARAFGCGLMLIRR 226 Gluconacetobacter diazotrophicus
WP_011930721   207 HGFGRARAFGCGLMLIRR 224 Acidiphilium
Q2FNT6         208 NGLGPAKGFGCGLMMVKR 225 Methanospirillum hungatei JF-1
WP_012618234   207 NGIGPAKGFGCGLMMVRP 224 Methanosphaerula palustris
Q314I5         201 QGVGPAKGFGCGLLLIRR 218 Desulfovibrio alaskensis G20
WP_014812298   210 GGIGPAKGFGCGLLLIRR 227 Desulfomonile tiedjei
jgi:Mzhil_1557 208 NGIGPAKSFGCGLMLVKP 225
CBK41286       214 EGVGPAKGFGCGLLLVRR 231
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap