1FC3


Conserved Protein Domain Family
Spo0A_C

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pfam08769: Spo0A_C (This model is not part of the current CDD release)
Sporulation initiation factor Spo0A C terminal
The response regulator Spo0A is comprised of a phophoacceptor domain and a transcription activation domain. This domain corresponds to the transcription activation domain and forms an alpha helical structure comprising of 6 alpha helices. The structure contains a helix-turn-helix and binds DNA.
Statistics
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PSSM-Id: 518490
Aligned: 103 rows
Threshold Bit Score: 89.5249
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1FC3_A         10 ITSIIHEIGVPAHIKGYLYLREAIAMVYHDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNLESISSLF 89  Geobacillus st...
17_pfamImport   1 --DILYQLGVYPTQRGYHITAVAVAIGRQEPEKLQMLTKWLYPAVALRCSCSSAAVERNLRATANRAWDTNS-----KLV 73 
CDB31124        4 legLLFRFGIYRCQEGYDCILAAMELVEEDETLLKRLIGGLYPAAAARCGNTRTSVERNIRTSIAKAWDANP-----GYF 78 
16_pfamImport   1 -SDILFRLGIYRIYQCHDYVFTTVTLACQDPELLQALSRRLYPAAAVQCQCTPIAVSRGIRNAVSRAWRLNP-----SLF 74 
CCY41861       10 VYDLLYRLGFSATNTAFFHLSYSVYLAALNPHWLVKPSQRLYPEVADQYNTNPLQVVRNIDGFACDSWRKNA--VLLRSF 87 
CDA81758        6 VSRTLCGLGLLPSSVCYFYMAEALRLSLREPDRLLLVTKHVYPDVARCFDTNWKCVERGLRRAANVAWNTAP-----EKL 80 
CDE48436       85 IASLLRCLGVPARLSGFNYLVETLLLLVNRPFETRLVTGEVYPVVAKQCNTTPIGVDQAIRTAVNQTWQEQNIPVYCALM 164
CDE49199      117 aHQLLTALGMPRTLRAWAFLPEMAALTVVHPPLLTDVTHGLYPLMARRAQLTPCAVERRLRLAIESTWNRGDYDAIARFF 196
CCX91913      135 VTNLLLSLNIPSKLRGYAYLREAIPRMMKDPD--QPITKVLYPAVGAVFGCKGTHVERSIRSAIDTAWKQRDDRVWQRYF 212
CCY76614      150 TSSLIRKLGIPAKMIGYKYAIDAIMITLEEPDAIVSITKDIYPKIGERYGTSPTNVERNIRYGIETAWSKRDSIMKTREG 229
1FC3_A         90 G-YTVSVSKAKPTNSEFIAMVADKL 113 Geobacillus stearothermophilus
17_pfamImport  74 SqIAQRELTGPPTAGDFVWMLCRHL 98 
CDB31124       79 SkIAHRSITQPPTAGDFLCMLHEYL 103
16_pfamImport  75 SvIAGHPVLTPPTPREFLCMVCNY- 98 
CCY41861       88 T---CRPLTTAPSSAQFLRILTHYi 109
CDA81758       81 SeLAHRHLTEKPSVSELLSLLTIYL 105
CDE48436      165 G-RSPAPHEPRPTSCEFLANVLmyv 188
CDE49199      197 G-QSVDPERGKPTNREFLCQLQERL 220
CCX91913      213 R-VGSDGVIPRPSNAAFISRLADAL 236
CCY76614      230 K-EIFGSCTKRPTNSEFINSCSEWL 253
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