Conserved Protein Domain Family
YfkB

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pfam08756: YfkB 
YfkB-like domain
This protein is adjacent to YfkA in B. subtilis. In other bacterial species it is fused to this protein. As YfkA contains a Radical SAM domain it suggests this domain is interacts with them.
Statistics
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PSSM-Id: 489862
Aligned: 21 rows
Threshold Bit Score: 279.942
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014823922 215 MYASDFAESLETIGLDEYRKVINEILDYRNKDIWVLFGTMPFYPCSRDERDLALIKRINNASNTTMRNDVDGRSRMNLNI 294 Solibacillus
Q9KEG3       220 MYPSDFASALDVASLDEIRKGIHRLLDARDKKTWMLFGTLPFYPCSDQEEDLMLLKRLYGEPNVTVRNDPDGRSRLNVNL 299 Bacillus halodu...
Q5WIH5       217 MYPSDFASSLEVASLDEIKSGIHRLLDCRNQNVWMLFGTLPFYPCSNNEDDLQLQKRLYSEPNVTVRNDPDGRSRLNVNL 296 Bacillus clausi...
WP_015594318 216 MYPSDFASNLAFLSINEIRQGIHHLLDIRNQDVWMLFGTLPFYPCNTNEEDLSLLKRLYESPNVTVRNDPDGRSRLNINI 295 Bacillus sp. 1N...
WP_012657509 219 MYPSDFASDLNVLTIEETKTAIRQLLSFRDEDTWMLFGTLPILPCSMNADDLSFLDDVHSAKNVTVRNDPDGRSRLNVNV 298 Macrococcoides ...
Q5HN57       220 MYPSDFASQLNVLSLKEMKEAIHHLLDIRDENTWMLFGTLPIYPCLNDEYDQHLLQRLRKSKNVTMRNDPDGRSRLNVNV 299 Staphylococcus ...
Q2FX16       219 MYPADFASQLNVLTLAEMKKTIHDILDFRDEDIWMLFGTLPVFPCLKDDEDQKLLSRLRNAKNVTTRNDPDGRSRLNVNV 298 Staphylococcus ...
WP_012685867 219 MYASDFARDLDVLSLDELRQAIHRMLDVRNEDLWMLFGTLPFFACSSEAADRELISRLRSAKNVTTRNDPDGRNRLNINI 298 Brevibacillus b...
Q67RS9       213 MYAVDWASDLPVLPLPAFREAIRRFLAERDPNLWVLFGTFPFLPCSPLPEDQDLLRAVAAAPNVSVRNCPDGRNRVNVDL 292 Symbiobacterium...
WP_015255479 228 MYPSAFAASLPMLSRAEMAAAIEQLIEHRDPNVWMLFGTLPFYRCSPEPEERRLARRLAETEGVTVRNDPDGRNRLNVNV 307 Thermobacillus ...
WP_014823922 295 FSGDISVTDFSDDgQAFGNIKNESLTQIYKRWLDSNISKSINCHCPAVKCLGANVIVKNMYYPETEFVSG 364 Solibacillus
Q9KEG3       300 FDGNIIVTDFGDT-PPLGNIMTTSFIEAYEKWQHSEISKELSCHCPMAECLGPNILVKNTYYRGVDFHKR 368 Bacillus halodurans
Q5WIH5       297 FSGDIIVTDFGDV-PKLGNIQDSRFDEAYARWRDSAINRSLSCHCPSVQCLGPNLLVKNTYYRETDFSKR 365 Bacillus clausii KSM-K16
WP_015594318 296 FSGDIIVTDFGDI-PPLGNIKETGLQHAYENWLTTSMAKQLTCHCPCVECLGPNILVKDRYYPEVDFTKN 364 Bacillus sp. 1NLA3E
WP_012657509 299 FTGDVIVTDFGDEtGTIENIIDTPLQDVYDKWKQSALNQTINCHCPKVKCLGPNLLVKNMYYPDIDFKVN 368 Macrococcoides caseolyticum
Q5HN57       300 FTGDVIVTDFGDEnGTISNIQKDKLTDVFNQWLNTDLAQSLNCHCAEYQCLGPNVLVKNMYYPNTDFKKK 369 Staphylococcus epidermidi...
Q2FX16       299 FTGNVIVTDFGDEtGTISNIQKDKLTDVFDKWLSSDLAKSLNCHCSEFSCLGPNVLVKNMYYPNMDFKDN 368 Staphylococcus aureus sub...
WP_012685867 299 FTGDVIVTDFGDV-EPLGNIQTDQLKSMFEKWQEHTLNQKINCFCPAAGCAGPNLLVANTYYQETDFTLR 367 Brevibacillus brevis
Q67RS9       293 FTGAVRVTDFGGM-EPLGNVRTERLEDAFRRWHAHPRFQRLNCHCPEVGCTGPDLLVAEMYYPEVDFRTR 361 Symbiobacterium thermophilum
WP_015255479 308 FTGDVFVTDFADV-PAFGNIREERLDDIFAKWLDGPLARSVNCHCPEAGCCGPNLLVKSMYYADVDFTTR 376 Thermobacillus composti
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