7F3E,7OG5,7E8J


Conserved Protein Domain Family
PIN_5

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pfam08745: PIN_5 (This model is not part of the current CDD release)
PINc domain ribonuclease
This is a family of bacterial and archaeal PINc domains. PIN domains are characterised by the conservation of three acidic residues, possibly four, an Asp at residue 13, a Glu at 63, and then Asps at 172 and 194 in Methanocaldococcus jannaschii RNA-free ribonuclease P. Family members include Homologs of Aquifex RNase P (HARP) proteins.
Statistics
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PSSM-Id: 518476
Aligned: 34 rows
Threshold Bit Score: 210.158
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7F3E_E         6 VFVLDTSVFTNPEIYRTFEEDQR-GAMETFIHLALN--SRAEF----YMPTSVYTEMRKIMDVGELWAE----FEMVVKI 74  Aquifex aeolicu...
A2BN08        12 vYVLDTSALTDTRLRSLLGSGSLdEAVRRFAELIAS--VRIAYgvevYMPPTVYEEARRFLLSNGVTVQsfeaLAAWITI 89  Hyperthermus bu...
WP_012991852   3 VFVLDTSVFTNPDVYSQFEKDQL-GAIEDFLSLAPH--TGATF----FMPTSIYDELCKMVDLGHLKPR----FELVVRI 71  Thermocrinis albus
O67035         3 VFVLDTSVFTNPEIYRTFEEDQR-GAMETFIHLALN--SRAEF----YMPTSVYTEMRKIMDVGELWAE----FEMVVKI 71  Aquifex aeolicu...
Q3JB93         3 RFILDTSVFTNPDTFNQFARDAV-EATRIFLQLARR--ADAEF----FIPGSVYEEFRLMKDLASLGGD----FESVVKI 71  Nitrosococcus o...
Q0A5J1         3 RFVLDTSVFTNPHCAVQFGEDPL-AGVQTFLHLARR--CPAEF----YMPLSVYDEFRRMRDLAEMAAD----FETDVWV 71  Alkalilimnicola...
A1WZ95         3 RFVLDTSVFTNPDVYLRFDEEPM-QAISVFLGLARR--ADAEF----YMPGPVYQELCNLRSMDLIGAE----FETEVYI 71  Halorhodospira ...
WP_013908649  11 RLIPDTSVFTNPDVYREFGNSPN-EAFANFLELVAK--A---PnvkvYMPSSVYDELKKMLKNPKIPPK----ARAVFRV 80  Thermodesulfata...
Q5JH27         2 KFVLDTSIFVNPEVRKNFGDNPT-EAMKTFLSYAEKlfGKVEF----YMPPGIYREVMHFVDSEELRPA----IELYIIK 72  Thermococcus ko...
7OG5_H         8 RFVLDTSVFTNPDVYLRFDEEPM-QAISVFLGLARR--ADAEF----YMPGPVYQELCNLRSMDLIGAE----FETEVYI 76  Halorhodospira ...
7F3E_E        75 RSPRRFQLTVPADFLYEFIEELRYRINKGLRIAEEHTREASGC---------------EDVGKLIARLREKYREALRQGI 139 Aquifex aeolicu...
A2BN08        90 KPPTRHEIRIPASIVRDYVEEVRARLARGLRVAEEHVRRAFEAgglyaaetasrearrEKLGAIIRGLRERYREATRHGM 169 Hyperthermus bu...
WP_012991852  72 RSPRRYNLTVPAEFLYEFIEDVRSRINKGLRIAEEHTREAGRLt-------------eEEVGKLINRLREKYREALRTGI 138 Thermocrinis albus
O67035        72 RSPRRFQLTVPADFLYEFIEELRYRINKGLRIAEEHTREASGCe---------------dVGKLIARLREKYREALRQGI 136 Aquifex aeolicu...
Q3JB93        72 RSPRRYSLTIPSEFLYELIHEVRHRIDRGLRIAEEHARMAAQPgt------------vADQGALITRLRERYRETLRRGI 139 Nitrosococcus o...
Q0A5J1        72 RSPRRFSMTIPAEILYEFIHELRGRIDRGLRIAEEHTRQAGAAt--------------dMRPELIASLRERYREAMRKGL 137 Alkalilimnicola...
A1WZ95        72 RSPRRFSMTIPSEVLYEFIEEVRTRIQRGLRIAEEHARQAGQAe--------------sLPPELITQLRERYREAMRRGI 137 Halorhodospira ...
WP_013908649  81 KSPKKYEIQIPAFLLYELIDDIRQRINKGLRVAEEAVRASAHKs----------------pDEILNALRRKYREALREGI 144 Thermodesulfata...
Q5JH27        73 KPPNVHELKIPAFVVYELIEDIRRRIDKGLRVAEKAVRESVLDt--------------dNVDNIIQKLRRNYRRALREGI 138 Thermococcus ko...
7OG5_H        77 RSPRRFSMTIPSEVLYEFIEEVRTRIQRGLRIAEEHARQAGQAes--------------lPPELITQLRERYREAMRRGI 142 Halorhodospira ...
7F3E_E       140 LDSKEDVDVLLLAYELDGVLVSADEGLRTWADKIGIKLIDPKNFKNILESLVR 192 Aquifex aeolicus VF5
A2BN08       170 LDSVEDLDAVLLALEVRGVLVSNDEGVRRFAEALGVISIDPPKFISVLQGLLR 222 Hyperthermus butylicus DSM 5456
WP_012991852 139 IDSKEDVDVLLLAYELDGILVTGDEGLRRWADRVGIKLIDPKSFRYILENLVK 191 Thermocrinis albus
O67035       137 LDSKEDVDVLLLAYELDGVLVSADEGLRTWADKIGIKLIDPKNFKNILESLVR 189 Aquifex aeolicus VF5
Q3JB93       140 VDSREDIDVLLLAYELDGVLLSADEGLRKWADKVGVKIILPQHLRRVLENLTS 192 Nitrosococcus oceani ATCC 19707
Q0A5J1       138 VDSREDVDAVLLAMELDAELVSADEGMRKLGNRMGVKLLTADYLRQVMENLga 190 Alkalilimnicola ehrlichii MLHE-1
A1WZ95       138 LDSREDIDVVLLAYELDATLVSADEGMRKFAERIGIKLVNPRYLRGVMQNLag 190 Halorhodospira halophila SL1
WP_013908649 145 VDSKEDIELILLALELDGLLLSADRGILNLADKMGIRWIPPEEIRDTIEGLIy 197 Thermodesulfatator indicus
Q5JH27       139 VDSKEDFELILLAMELDATIVSADVGILTWAQKMGIKWVDSSVFREVLEGLVE 191 Thermococcus kodakarensis KOD1
7OG5_H       143 LDSREDIDVVLLAYELDATLVSADEGMRKFAERIGIKLVNPRYLRGVMQNLag 195 Halorhodospira halophila SL1
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