Conserved Protein Domain Family
Rad54_N

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pfam08658: Rad54_N (This model is not part of the current CDD release)
Rad54 N terminal
This is the N terminal of the DNA repair protein Rad54.
Statistics
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PSSM-Id: 518413
Aligned: 79 rows
Threshold Bit Score: 125.065
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003685145  28 VDDARNVLSKPFKVPYkvskpa---------gstsrSPTVLANTRRVLRERNK--NvSYKGLDGDGAelnSLQNIDGvvn 96  
KAJ9103508    28 VKDSAVRLQRPFKVPF---------------------ATNHVESRQPARKARK--VtNYVEVFEDGNgeqADGvdgeg-- 82  
XP_002549333  29 VTDSAVRLAKPFKVPFankh------------eatvEGGVTIVSRRPVRSTRk--VtNYAVDGIVITddnN----DDldv 90  
EMG46127      29 VNDSATRLAKPFKVPFatqt------------stvvSNGVTTISRRPVRSSRk--RtNYAVDGIIINdddE----TDlsv 90  
Q5AKX3        29 VTDSATRLSKPFKVPFssst------------qnsvSSETITISRRPVRSTRk--RtNYAVDGITSEkddEEEYNNDqnv 94   Candida albicans
XP_036665681  29 VHDSATRLLKPFQVPFktrs-------------etvSG---IVSRRPVRSSRk--FtNYAVed------fGNGSADDenv 84  
1_pfamImport   1 VTDSSARLARAFKVPFktrpgtdpgfgssssssssmLSSSNGLPHRPVRSTRk--YtNYAVDDIELVrd-----dDDntv 73  
CCH44834      27 MTDSSSTLSKPFKVPFktrs------------saisSGG------KPVRSARLkgPeSYAMMSVEDDkenNDMvdidg-- 86  
XP_002492436  27 VSNPLAIISRPFKIPVar----------------dtSRNHSTLNGRQVRKARLkgPsSYALMEId----tNIVADSDlsv 86  
XP_013934746  31 YEDPSQKLCKPFKSPIl-------------------VSAAVSAAGRQIRTARAkgPqSYAELGQENIpfgSTKDDDEqyg 91  
XP_003685145  97 eng-eliktRRKDALSARRLAEDPERLSRIELTLRKTFNVPIKGYTQRHS-------LPLTLGTKRKIISEPRPLHDPSD 168 
KAJ9103508    83 ----nivrnKRFGALLPRLVN-----VDHGDRKLKKSFSVPFAKGSKGEAtygtnggPPPALGTRRQAILPPRPLHDPTS 153 
XP_002549333  91 ngegegikrKRYGALLPRAVNK--NVSKN-ENAFRKSFTIPFAKNNPKQsei--nraPPPPLGTKVKPILPPRALHDPTS 165 
EMG46127      91 dgdgqsfkrRKFGVLLPRALMKSDNMVKN-EDKFRRSFTVPFAKDNAKQndi--qrgPPPPLGTKVRPILPPRALHDPTS 167 
Q5AKX3        95 ngdgqiikrKKFGALLPRSIINSDNIAKN-EDKFKRSFTVPFDKNNSKQtei--qrgPPPPLGTKVRAILPPRALHDPTS 171  Candida albicans
XP_036665681  85 nesgdvvkcKRFGALLPRSINSDGRRDVI-DNKIKRSFTVPFSKDNAKKdem--irgPPPPLGTKVRPIIPPRALHDPMS 161 
1_pfamImport  74 dengeivrrKKFGALLPRSLINSDNLAKN-ETKFKKSFTVPFKKDNAKReemisravPPPPLGTKVRPILPPRALHDPMS 152 
CCH44834      87 -----qtimKRKNALSLRRLITDNNYGSTMETTLRRSFTSPLASKPNAANi-----lPPPPLGTKRKPIMVPRPLHDPSD 156 
XP_002492436  87 gadgevvvrGKKGALTSRRMLDSEG--RS-SPILNKKFTVPIKIDKENAFerq-nsqPPPPLGTKRKPTLPPRPLHDPMS 162 
XP_013934746  92 -------lnKKKGALLPRNVL---SSMDETNKILTRKFKAPVKSGADNEYelm-naqPPPPLGNRKRLYFPPKPLHDPLG 160 
XP_003685145 169 ELAIVLYDPSVDgdmiiqedadq-------------vesirdiatmGNKKEQEKEKEKQKQMEIERlahqqkfshrsvmp 235 
KAJ9103508   154 EFAIVLYDPTMEsfdqgd----------------------dgdkkePTPESETD-----DSKKDSSrr------------ 194 
XP_002549333 166 EFAIVLYDPTVDvipkieei------------------kdeesdksPTPE-EDKDYKEEPDERPAkr------------- 213 
EMG46127     168 EFAIVLYDPTVDvipkiee--------------------isegeksPTPE-ETK----PEQQKNGkk------------- 209 
Q5AKX3       172 EFAIVLYDPTVDkipkiseve-----------------sstssstsPEPEPETK----ETEERPIkr------------- 217  Candida albicans
XP_036665681 162 EFAIVLYDPTVDvipktp----------------------eeekkiEELDSSDTSMNSEMDERPAkr------------- 206 
1_pfamImport 153 EFAIVLYDPTVDvipkiedengeekdkdkeadtstesaagaallssPPLSSESS----GIEERPAkr------------- 215 
CCH44834     157 ESAIVLYDPTVEkiisdddlea---------------ldkaiaeakARDEGKTLECSIELEERPSkr------------- 208 
XP_002492436 163 EYAIVLYDPTVDiipeik-----------------------eeddrLRKEQEELEMERKKAEQITNknk----------- 208 
XP_013934746 161 EYAIVLYDPTVDvipg---------------------------mkeEEEAALAAAKAAAAAEEPQKpa------------ 201 
XP_003685145 236 ngiRNKPLTELLKHN 250 
KAJ9103508   195 -ksQHRSLAEILGIY 208 
XP_002549333 214 -rkVHKSLAEILGIV 227 
EMG46127     210 -srTHKSLAEILGIV 223 
Q5AKX3       218 -krTHKSLAEILGIV 231  Candida albicans
XP_036665681 207 -rkTHKSLAEILGIV 220 
1_pfamImport 216 -rkTHRSLAEILGIV 229 
CCH44834     209 -rnVHKSLNEILGIT 222 
XP_002492436 209 rikPGKSLAEILGIA 223 
XP_013934746 202 -ksAHKSLNEILGIS 215 
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