Conserved Protein Domain Family
Rad54_N

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pfam08658: Rad54_N 
Rad54 N terminal
This is the N terminal of the DNA repair protein Rad54.
Statistics
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PSSM-Id: 400820
View PSSM: pfam08658
Aligned: 82 rows
Threshold Bit Score: 125.452
Threshold Setting Gi: 403166558
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003685145  29 DDARNVLSKPFKVPYkvskpa---------gstsrSPTVLANTRRVLRERNK--NvSYKGLDGDGAELnsLQNIDGvvne 97   Tetrapisispora...
XP_001482577  29 KDSAVRLQRPFKVPF---------------------ATNHVESRQPARKARK--VtNYVEVFEDGNGEqaDGvdgeg--- 82   Meyerozyma gui...
XP_002549333  30 TDSAVRLAKPFKVPFankh------------eatvEGGVTIVSRRPVRSTRk--VtNYAVDGIVITDDn----nDDldvn 91   Candida tropic...
EMG46127      30 NDSATRLAKPFKVPFatqt------------stvvSNGVTTISRRPVRSSRk--RtNYAVDGIIINDDd----eTDlsvd 91   Candida maltos...
Q5AKX3        30 TDSATRLSKPFKVPFssst------------qnsvSSETITISRRPVRSTRk--RtNYAVDGITSEKDdeEEYNNDqnvn 95   Candida albicans
CCE42510      30 HDSATRLLKPFQVPFktrs-------------etvSG---IVSRRPVRSSRk--FtNYAV------EDfgNGSADDenvn 85   Candida paraps...
EDK45374      30 TDSSARLARAFKVPFktrpgtdpgfgssssssssmLSSSNGLPHRPVRSTRk--YtNYAVDDIELVRDd-----DDntvd 102  Lodderomyces e...
XP_011273329  28 TDSSSTLSKPFKVPFktrs------------saisSGG------KPVRSARLkgPeSYAMMSVEDDKEnnDMvdidg--- 86   Wickerhamomyce...
XP_013934746  32 EDPSQKLCKPFKSPIl-------------------VSAAVSAAGRQIRTARAkgPqSYAELGQENIPFgsTKDDDEqyg- 91   Ogataea parapo...
XP_002492436  28 SNPLAIISRPFKIPVar----------------dtSRNHSTLNGRQVRKARLkgPsSYALMEI----DtnIVADSDlsvg 87   Komagataella p...
XP_003685145  98 ng-eliktRRKDALSARRLAEDPERLSRIELTLRKTFNVPIKGYTQRHS-------LPLTLGTKRKIISEPRPLHDPSDE 169  Tetrapisispora...
XP_001482577  83 ---nivrnKRFGALLPRLVN-----VDHGDRKLKKSFSVPFAKGSKGEAtygtnggPPPALGTRRQAILPPRPLHDPTSE 154  Meyerozyma gui...
XP_002549333  92 gegegikrKRYGALLPRAVNK--NVSKN-ENAFRKSFTIPFAKNNPKQsei--nraPPPPLGTKVKPILPPRALHDPTSE 166  Candida tropic...
EMG46127      92 gdgqsfkrRKFGVLLPRALMKSDNMVKN-EDKFRRSFTVPFAKDNAKQndi--qrgPPPPLGTKVRPILPPRALHDPTSE 168  Candida maltos...
Q5AKX3        96 gdgqiikrKKFGALLPRSIINSDNIAKN-EDKFKRSFTVPFDKNNSKQtei--qrgPPPPLGTKVRAILPPRALHDPTSE 172  Candida albicans
CCE42510      86 esgdvvkcKRFGALLPRSINSDGRRDVI-DNKIKRSFTVPFSKDNAKKdem--irgPPPPLGTKVRPIIPPRALHDPMSE 162  Candida paraps...
EDK45374     103 engeivrrKKFGALLPRSLINSDNLAKN-ETKFKKSFTVPFKKDNAKReemisravPPPPLGTKVRPILPPRALHDPMSE 181  Lodderomyces e...
XP_011273329  87 ----qtimKRKNALSLRRLITDNNYGSTMETTLRRSFTSPLASKPNAANi-----lPPPPLGTKRKPIMVPRPLHDPSDE 157  Wickerhamomyce...
XP_013934746  92 ------lnKKKGALLPRNVL---SSMDETNKILTRKFKAPVKSGADNEYelm-naqPPPPLGNRKRLYFPPKPLHDPLGE 161  Ogataea parapo...
XP_002492436  88 adgevvvrGKKGALTSRRMLDSEG--RS-SPILNKKFTVPIKIDKENAFerq-nsqPPPPLGTKRKPTLPPRPLHDPMSE 163  Komagataella p...
XP_003685145 170 LAIVLYDPSVDgdmiiqedadq-------------vesirdiatmGNKKEQEKEKEKQKQMEIErlahqqkfshrsvmpn 236  Tetrapisispora...
XP_001482577 155 FAIVLYDPTMEsfdqgd----------------------dgdkkePTPESETD-----DSKKDSsrr------------- 194  Meyerozyma gui...
XP_002549333 167 FAIVLYDPTVDvipkieei------------------kdeesdksPTPE-EDKDYKEEPDERPAkr-------------- 213  Candida tropic...
EMG46127     169 FAIVLYDPTVDvipkiee--------------------isegeksPTPE-ETK----PEQQKNGkk-------------- 209  Candida maltos...
Q5AKX3       173 FAIVLYDPTVDkipkiseve-----------------sstssstsPEPEPETK----ETEERPIkr-------------- 217  Candida albicans
CCE42510     163 FAIVLYDPTVDvipktp----------------------eeekkiEELDSSDTSMNSEMDERPAkr-------------- 206  Candida paraps...
EDK45374     182 FAIVLYDPTVDvipkiedengeekdkdkeadtstesaagaallssPPLSSESS----GIEERPAkr-------------- 243  Lodderomyces e...
XP_011273329 158 SAIVLYDPTVEkiisdddlea---------------ldkaiaeakARDEGKTLECSIELEERPSkr-------------- 208  Wickerhamomyce...
XP_013934746 162 YAIVLYDPTVDvipg---------------------------mkeEEEAALAAAKAAAAAEEPQkpa------------- 201  Ogataea parapo...
XP_002492436 164 YAIVLYDPTVDiipeik-----------------------eeddrLRKEQEELEMERKKAEQITnknk-----------r 209  Komagataella p...
XP_003685145 237 giRNKPLTELLKHN 250  Tetrapisispora phaffii CBS 4417
XP_001482577 195 ksQHRSLAEILGIY 208  Meyerozyma guilliermondii ATCC 6260
XP_002549333 214 rkVHKSLAEILGIV 227  Candida tropicalis MYA-3404
EMG46127     210 srTHKSLAEILGIV 223  Candida maltosa Xu316
Q5AKX3       218 krTHKSLAEILGIV 231  Candida albicans
CCE42510     207 rkTHKSLAEILGIV 220  Candida parapsilosis
EDK45374     244 rkTHRSLAEILGIV 257  Lodderomyces elongisporus NRRL YB-4239
XP_011273329 209 rnVHKSLNEILGIT 222  Wickerhamomyces ciferrii
XP_013934746 202 ksAHKSLNEILGIS 215  Ogataea parapolymorpha DL-1
XP_002492436 210 ikPGKSLAEILGIA 223  Komagataella phaffii GS115
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