7XTD


Conserved Protein Domain Family
SPT16

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pfam08644: SPT16 (This model is not part of the current CDD release)
FACT complex subunit (SPT16/CDC68)
Proteins in this family are subunits the FACT complex. The FACT complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin.
Statistics
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PSSM-Id: 518401
Aligned: 72 rows
Threshold Bit Score: 81.8437
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7XTD_j        550 ISIDPKAQTIILPICGRPVPFHINSFKNG--SKNEEGDY-MYIRLNFNSPgm------gSSvKKTelpyedgDDK----- 615  Komagataella ...
XP_007604605  396 IHLDWDNFFVLVPILSYSVPFHISTIKNV--SIVNPNDe-pRLRINFKESkeikeafdvNK-ECD--------------- 456 
XP_001325321  482 IEIIKPRWTVLLPMYGRLVPFHINTIKSAkaSTSTDSTe-sKLDINFNIP-----------------------KAtdset 537 
XP_004992662  510 IFVDSKHETVILPIFGIATPFHISTIKNT--SYADDTQt-pFLRINFATPgi------tTI-RSGata--gqPSL----- 572 
A0BFZ6        497 IYIDNQKCALLVPLMGTHIPFHVSCIKNV--SKIDEGKmgsSIRINFFTSet------tAG-QIQf------PKVdg--- 558  Paramecium te...
XP_001018189  531 IHIDAAHNAILLPVNGELVPFHISLIKNY--SKNDEGKt-hTLRLNFHNPgsg----snLA-NITf------PKIdg--- 593 
XP_004032041  528 IHIDIKHECILLPINGELVPFHISLIKNY--QKIDEGKt-yTLRLNFHNIsg-----gnLS-NIQf------PKNea--- 589 
XP_002674312  460 IIVDKRHGSVLLPINGSHVPFHIAAIKNV--NTTDEGEy-vHLRINFNNTklnfgkvyePA-KLY-------KHL----- 523 
A0E089        521 IAVDQDKSAILIPIIGTHYPFHALTIQNV--SVKELPNGaGEITIRFWTNefhid-------------trefPSMdq--- 582  Paramecium te...
Q580R3        507 IYVDTEKEVAFFPVCGGVAAFHVSTISRV--DVKFEGNq-vAGIFSFHSLqegni------------ayrlnRTK----- 566  Trypanosoma b...
7XTD_j        616 --EFVRSLTFRSTNKERMSEVFKAITELKKTAVKRDQERK--TMEDVVAQAQL 664  Komagataella phaffii
XP_007604605  457 --TKIKFITLRCGN---VEDMISQINEMRKEFNKP--------KISLPTQPVL 496 
XP_001325321  538 fkYFIKELTFSQKGNQMFDQIAKDINSMRSHFTKLLKRKQ--EEKTLYKGEDL 588 
XP_004992662  573 --VYLKEISYRGSAAS-IQAAHTGIKNLQSRYRQLERERK--EREDLVEQADL 620 
A0BFZ6        559 etIFIKELQYRSKKSDRPQNLILQIKSLQKKVKTEQQVER--EKQNVGETEPL 609  Paramecium tetraurelia
XP_001018189  594 qiVFIKELTFRSKNAKNMLETIKKIKDLQAKVKQTDQEAK--NKDELVEQDKL 644 
XP_004032041  590 qsIYIKELSFRSKNSKNLQEIMKKIKDLQTKIKQNEQDQK--QREDIIEQEKL 640 
XP_002674312  524 --VFVKEISYRAKDSKRLESARREILELKKQIGQEERDREfnENNKEVDQPKL 574 
A0E089        583 dqMFLKEITLRNQEFIKLQDIENEINVCRDDARRKQIEKQleVDKFDFVIEKL 635  Paramecium tetraurelia
Q580R3        567 --IFVKELTYRARRDI-FTDVKIAIQGIQQRIKNRDTERR--RVSLNAGGAQL 614  Trypanosoma brucei
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