6ND4


Conserved Protein Domain Family
U3_assoc_6

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pfam08640: U3_assoc_6 
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U3 small nucleolar RNA-associated protein 6
This is a family of U3 nucleolar RNA-associated proteins which are involved in nucleolar processing of pre-18S ribosomal RNA.
Statistics
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PSSM-Id: 400804
View PSSM: pfam08640
Aligned: 98 rows
Threshold Bit Score: 66.0221
Threshold Setting Gi: 74951955
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6ND4_P                 8 LEQCIPEMDDLVEKGLFTKNEVSLIMKKRTDFEHRLN-SRGS--SINDYIKYINYESNVNKLRAKRCKRILQv----KKT 80   Saccha...
Q4UD34                 9 LEDFAPDLRELLLRDLFTLKEIKSIVDRRRKFEFDII-SPDPnlSLISYKNYIKYELELDKLLQSRYRKSKLmnknkNSN 87   Theile...
XP_018651599           9 LEDSVGEILHIRKAKLFNRLEINEIVRKRRHHEYSLQ-KRNK--RILDYDAYISTEITIIKLLRCRRQITND-------S 78   Schist...
CDS41228               9 vEDSLPEIVHIRRAKLFNEAELREVVRLRRHHEYSIQ-KRNK--RLSDYESYIAAELGILRLVIIRRQKTMD-------F 78   Echino...
WGS:AFBI:EDEG_00037    9 LETIEKEIKTYEDLQIFTNDELNTISKKLNGFEHKISiSTED--NFLYILKYIQYLQILQKLIKKRLSNSEIsnnrnSEK 86   Edhaza...
jgi:OSTLU_119550       8 LERASQDLMKLELAGIITPQERKHIFSTRSKHENSLArQRGS--SERAFLAYSSYELALETTLRLRMRKSRHhalasTVQ 85   Ostreo...
Q4DSU2                11 LERLLPSLEEYFTSGLLTHDETQDLARQRTHWEYRLI-AKPL--LLLDVQNAVAYELGLEKRIEEYCRTTKLvlkhrwav 87   Trypan...
Q38CX5                11 LEKLLPAMEEYFTSGFLTREETHEVARQRSHWEYRLV-AKPL--LLLDVRSAARYELELEERLRQYCVATKLvlrhrwsi 87   Trypan...
XP_001568299          11 LEKLVPALDEYYTSGFLTREETVEVSRQRQHWEFRLV-AKPL--LLLDVREAITYELGLEKRLREYCIYTKLnlqhrwdi 87   Leishm...
XP_001611532           9 LEGMVPELRKLTELQIFTDEEVRDIVERRRKFEYAVI-SSDLvySRNSYREYISYEIELDRVLQKRLRKVKSsdnsaSVR 87   Babesi...
6ND4_P                81 NSLSD 85   Saccharomyces cerevisiae BY4741
Q4UD34                88 HSTIN 92   Theileria annulata
XP_018651599          79 RYLDK 83   Schistosoma mansoni
CDS41228              79 RFKDE 83   Echinococcus multilocularis
WGS:AFBI:EDEG_00037   87 NSncd 91   Edhazardia aedis USNM 41457
jgi:OSTLU_119550      86 QHvrr 90   Ostreococcus lucimarinus CCE9901
Q4DSU2                88 lerie 92   Trypanosoma cruzi
Q38CX5                88 ierve 92   Trypanosoma brucei
XP_001568299          88 vdrie 92   Leishmania braziliensis MHOM/BR/75/M2904
XP_001611532          88 YTvps 92   Babesia bovis T2Bo
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