5IC9,7AJT,7MQ8


Conserved Protein Domain Family
Utp13

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pfam08625: Utp13 (This model is not part of the current CDD release)
Utp13 specific WD40 associated domain
Utp13 is a component of the five protein Pwp2 complex that forms part of a stable particle subunit independent of the U3 small nucleolar ribonucleoprotein that is essential for the initial assembly steps of the 90S pre-ribosome. Pwp2 is capable of interacting directly with the 35 S pre-rRNA 5' end.
Statistics
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PSSM-Id: 518388
Aligned: 139 rows
Threshold Bit Score: 112.224
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5IC9_D          5 EQTLENYIHAGAYRDAIVLALQLNHPGRLLNLFTNVVTTRn----------------pDPDSLTGL-K--------AVDD 59   Thermochaetoi...
XP_004359966 1095 QQMLDTSLLKKDYSRSLKLALILNQPHQSLRIFQTIVMEQdk--------------qiEENNQDNN-S--------LMKS 1151
XP_020431625  798 QQSLDTSLRQRDFKRALKLALILNQPRQSLNIFNMMM-----------------------ESENGE-D--------LIKS 845 
Q7KWS8        702 KQHLDTAIRKKDYYSALKLALVLDQPRQTLNIFNSMY---------------------YDDQSIGE-S--------VIQG 751  Dictyostelium...
XP_003288751  699 KQHLDTALRKKDYYGALKLALVLDQPNQTLNIFKSMY---------------------YDDETVGV-S--------VVES 748 
XP_004035578  211 QQHLR----NQDYLNAARVAFQYNFVSKFHQSLELLFNRQnfqneiiyt-vsdmqfqiNENNINDE----------EIQN 275 
Q23DL4        944 QDNFKQLIRNQDYINAVKLAFRFNFVSKFHQALELMFHKKdfkneiiyseneikqikkNNEEEDEFeK--------NIRE 1015 Tetrahymena t...
XP_001749085  963 SQELDNLMAADEHAEAFKLALRLERPRTILKLTRNLV----------------------EREQEDA-----------LRT 1009
XP_004993215  655 DQELNNLIQSQEYAEAFRRAVNKNRPRTLLRLLRHL----------------------RDADEMDE-----------VEP 701 
XP_002140495  788 ITQVDVLIKQNNLIEALNLALDLNLQLKTFQALEKILQPKfnnffssks-ldgsynlsNYQDKIELaRieqieyigGLKE 866 
5IC9_D         60 VLAKLSDEQIFQLLLRLRDWNTNARTAPVAQRVLWALFKSHPANKLSSLsvkgarghK---------------------- 117  Thermochaetoi...
XP_004359966 1152 VLSKLSTNDLLKCLKYIRDWNTNSRFVHVSQIVLYSILTLLKAEQLLSF--------Ek--------------------- 1202
XP_020431625  846 TLKKFGKLDIVKILKFVRDWNTNSKFVPVSQIILRSIMTMYLPSEIIKI--------H---------------------- 895 
Q7KWS8        752 CIGRLSPNEVVKCLRFIRDWNTNSKFVSISQIVLNSIITSFKPDELSKL--------Sv--------------------- 802  Dictyostelium...
XP_003288751  749 CVSRLYDNEIIKCLRYIRDWNTNSKFITISHVVLNAIIVNFKPDHLSRL--------Sl--------------------- 799 
XP_004035578  276 LILNFMQLDFNKLLYYIRDMNTIQKYSKVAQKVLNYVIMNTHIDQFEGL--------Sknfkkqekqkken-nkddkinn 346 
Q23DL4       1016 LVTNLIELDINKLLIYIRDLNTMQKSSKVAQRLLNYVIRSIPIDDYQEI--------Skkfkvpkkpskkeqeeqtkips 1087 Tetrahymena t...
XP_001749085 1010 IIADLGTEQLQLLLGFMKDWNVNSRSALLAQTLLHHVLATHDVAKLAQT--------P---------------------- 1059
XP_004993215  702 CIQQLDIEQITRLLSFIENWNFNSKTSREAHELLNIIITTTSHDHLLKI--------P---------------------- 751 
XP_002140495  867 WFRQLSVNQIAIILKFTLEWVTIPKTVWLANTVMIFILCTINPSVLYKV--------E---------------------- 916 
5IC9_D        118 -----SLNEVLDAIKVYTERHYKRIEELVDESYLVEYTLREM 154  Thermochaetoides thermophila DSM 1495
XP_004359966 1203 -----ELATLLESMIPYNEKHFNRVDRIIQKTYLLDYTIASI 1239
XP_020431625  896 -----ELPELLESLIPYNERHFQRLDRILQKTYLLDFTISSI 932 
Q7KWS8        803 ----gEMPKLLESIIPYTDRHFQRIDKMLQKTYLIDFTIQSI 840  Dictyostelium discoideum
XP_003288751  800 ----nEFPKLLESLIPYTDRHFQRIDRMLQKTYLIDFTIQSI 837 
XP_004035578  347 ctpqqEFINMLEILISYSQRHGERMEKFIKKSYYLDLVLQKM 388 
Q23DL4       1088 dseksEFEQLLQVIISYSKRHAERMERFIKKSYYLDFVLKKI 1129 Tetrahymena thermophila SB210
XP_001749085 1060 -----ALGRTVNALIAYTERHFQRLQKLAQQSHVLDFVWRSI 1096
XP_004993215  752 -----NCAKTLDSLIAYSERHMRRIQQLTQKTAFLDYTHEGM 788 
XP_002140495  917 -----GFTQISAAFRAYNEKYKSRWLSLDQKAYLLDYLFLPN 953 
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