Conserved Protein Domain Family
Rsm1

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pfam08600: Rsm1 
Rsm1-like
Rsm1 is a protein involved in mRNA export from the nucleus
Statistics
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PSSM-Id: 369989
View PSSM: pfam08600
Aligned: 10 rows
Threshold Bit Score: 107.176
Threshold Setting Gi: 74683528
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q7RZE5       327 ALALALLGW-------------QGLTNPRLGtavpnSASCHTCLRRLGLWMFKSKQVDPETntilvpaPMDHLDPLREHR 393 Neurospora crassa
Q2UM18        70 AFALAFFGW-------------DSVADGAAG-----LAGCGACFRRLGLWMYKPKNNGDVS-------VYDALDVATEHM 124 Aspergillus oryzae
EDN09887     291 AFALATFGW-------------DATPDIGAG-----LATCGACFRRLGLWMYKPKEDGSIS-------VYAKLDVVGEHL 345 Histoplasma cap...
Q5M8S7       239 ACILALCGWs------------TSYTSGSLC-----IINCPRCMRKVGLWAFQQLEAVELDnsl--sapNTPVSPAEGH- 298 tropical clawed...
Q5KC46       283 ASQLALFGWfpyhpnyptiqisLNTPSSRTE-----IVCCRICHRRIGLWNFSNEKDG-----------VKRFDVLNEHL 346 Cryptococcus ne...
Q0UPA0       295 AFAFALFGW-------------SGLSESRIS-----LAVCDHCFQRLGLWLSSDTRLKEMSkkldvpiESLRLNLLESHR 356 Parastagonospor...
XP_001595977 237 ALMMSLCGW-------------QGHKHDRLGhq-leSVSCQTCYRILGLWMFKSKSIS-ATgketepaIVPGLDPIAQHR 301 Sclerotinia scl...
CBF85817     263 AFILAFLGW-------------DSV-DGTQG-----LAGCGACFRRLGLWMYKPKGDGEAA-------V--PLDVASEHM 314 Aspergillus nid...
CAK48313     410 AFILAFFGW-------------DSVPDGTAG-----LVGCSVCFRRLGLWMYKPKANGDEA-------LYDSLEVVNEHM 464 Aspergillus niger
Q0CK85       288 AFMLAFFGW-------------DTVSDATAG-----LLGCSACFRRLGLWMYKPKDNGGTP-------LHDSLDLVQEHM 342 Aspergillus ter...
Q7RZE5       394 FFCPWKNPQAQRNPGAKPLARGETNk----AAWEVLVEGLK 430 Neurospora crassa
Q2UM18       125 EYCPWVSGKAQSGTGKSSEKSAELR-----SGWELLAQALK 160 Aspergillus oryzae
EDN09887     346 DYCPWVNPETQSGGRKPVLHGFDGKr---qSGWEILAQAIK 383 Histoplasma capsulatum NAm1
Q5M8S7       299 ERSPFGIMSPNRRVTRSRDAEQSPAl---aYGRTRSSDLLS 336 tropical clawed frog
Q5KC46       347 VWCPVRIQDGEKEWWSESGLLDGQStqakrIGEGGIKGLVK 387 Cryptococcus neoformans
Q0UPA0       357 EHCPWKNATTQSNSSDGPIANM--------AAWKTLQFILL 389 Parastagonospora nodorum SN15
XP_001595977 302 EYCPWRNPISQNGLAATQNSKSREL-----AGWEVVLRVLK 337 Sclerotinia sclerotiorum 1980 UF-70
CBF85817     315 EYCPWINARAQSGTGRPAGKTDKLH-----SGWELLAQALK 350 Aspergillus nidulans FGSC A4
CAK48313     465 DYCPWVNGKAQSGTGRATEKLEGLR-----SGWELLGQALN 500 Aspergillus niger
Q0CK85       343 EYCPWVSGKAQSGTGKASDEKEYLM-----SGWQLLAQALK 378 Aspergillus terreus NIH2624
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