Conserved Protein Domain Family
RMI1_N_C

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pfam08585: RMI1_N_C (This model is not part of the current CDD release)
RMI1, N-terminal OB-fold domain
This is the OB-fold domain found at the N-terminal of RecQ-mediated genome instability protein 1 (RMI1), which forms a stable complex with Bloom syndrome protein BLM and DNA topoisomerase 3-alpha.
Statistics
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PSSM-Id: 518358
Aligned: 95 rows
Threshold Bit Score: 92.7141
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003665188  69 LPARLa-----qTHAgtreAALPHD-VVVQVLDVEDVARSRWEQVEALEALERGEGTRGREIIRLNTassssssssgadg 142
EPS43900      67 FPPNI-------HDIsvpqSLIKGP-VVAQIVDVEDIGHSKYSQLEALESAERGEKTKGKEVIRVIPg------------ 126
CCG81811      66 SPQSLalshssgSSG------SSGSgVMVQVVACEEIGHSLTTQLMHLEDYEERQKPVHRRLIRVPGttttttddhdgqg 139
XP_007872943  63 LPADIfdkh---------nqvLPGP-YCLQIIHVQDIGISIFNQLEYLEQFDESGTIKSYNVIWNNLsdiddde------ 126
Q10160        64 APYIVseqh---------nvrIENT-MLLQIVRVREIGISIVNQLEYLNDLEELKKLKGQKVIRLVHdesgdeeq----n 129 Schizosaccharom...
XP_013023436  64 APYAIsdqh---------nitLSKP-LLVQVVRIREIGKSIVSQLEYLNQLEERKKLKGQQIIRQVDeddqedke----g 129
XP_003841730  66 FPQDI-------LNGtvqsRSVAGP-ILCQILDIEDIGHSRWSQVESIEAQERGEMTKGREIVRVVEq------------ 125
XP_014075343  66 FPSDV-------LNGntqsRIVPGP-VVCQVLDIEDIGHSRWSQVEAIEAKERGETTKGREIVRVVEq------------ 125
Q0U0Z4        66 FPPDI-------LRGtvqsRIIPGP-VVCQLLDVEDIGNSRWSQVEAIESKERGETTKGREVVRVVEq------------ 125 Parastagonospor...
XP_011127852  67 FPATI-------HDLenrsSRLKGP-VVAQIVDIEDIGHSKLFQLDALESAERGEKTKGKEVIRVIPg------------ 126 Orbilia oligosp...
XP_003665188 143 taegaeeEEeeeggnaaAGAGGGGggggrggatstsnnnnnnnssssSSSSKNGTHKLVVQDCkGQKVHAIELKRVERLG 222
EPS43900     127 -------EAddt--dpdNLGLSGV----------------------------GGPHRLLLEDAkGTRVYGMEFKAIKDVS 169
CCG81811     140 daavssgGGps----------------------------------eeSVMVHKKMCRVVVEDHrGTRMYGIESGPVAGLQ 185
XP_007872943 127 ildtdkpAS-------------------------------------------KKFCKLLLEDSsGLCVWAIEHKPIKHIH 163
Q10160       130 dddglteAQdavqkgseL----------------------------------KKMCRLILEDSnGQRFWGLERKPIKGIQ 175 Schizosaccharom...
XP_013023436 130 ddsgiaeAQeaifdgkgF----------------------------------KCMCRLVLEDAnGQRFYGMEWKPIPGIQ 175
XP_003841730 126 -------ENegs---seAATPIQS----------------------------KGPFKLLLQDAkGLKIYAFDLRGIDGLN 167
XP_014075343 126 -------DNeaa---teSAAPAQS----------------------------KGPFKLLLQDAkALKIYAMDLRGIDGLH 167
Q0U0Z4       126 -------ENddp---saAVAPIHS----------------------------KGPFKLLLQDAkSLKMYAYDIRGIDGLN 167 Parastagonospor...
XP_011127852 127 -------EQddn--dpdNLGLTGA----------------------------SGPHKLLLEDAnGTRVYAFEFKPITGVG 169 Orbilia oligosp...
XP_003665188 223 VgRTFIGEKILLRaGTVLARGVVLLDPAHCVVLGGKVESWHRAWLDGR 270
EPS43900     170 I-GMNIGSKVVLK-DVKALRGVLLLEPGNTTLVGGKVEELHKQWREDR 215
CCG81811     186 V-GMTLGAKLLLN-AVPVVHGVLVLSPGKVVWLGGRVEALNQGRLDSR 231
XP_007872943 164 I-GINLGTKILLK-NILVLRGVLILNPSNITFLGGQIFELNKNYFPSG 209
Q10160       176 L-STKLGTKLLVK-NVLVRRGVLMLDPNNTTILGGSIEEWDKDYFPKR 221 Schizosaccharomyces pombe 972h-
XP_013023436 176 L-DTDLGTKLIIQ-NAQIKRGTLLLTSENTKILGGKVDEWNHEYFPNK 221
XP_003841730 168 T-SMTMGAKLILK-NVDVRRGAIMLEPGNVQLLGGKLDALDKAWKESR 213
XP_014075343 168 T-NMAMGAKLVLK-DFDVRRGVAMLEPGNVQVLGGKMEALDKAWKEGR 213
Q0U0Z4       168 T-NIAMGTKLVLR-NFDVRRGVAMLEPGNVQILGGKLEALDKAWKEGR 213 Parastagonospora nodorum SN15
XP_011127852 170 I-GMNIGTKVVIR-DVKVVRGVLMLQPGNTTMVGGKVEELHKNWREER 215 Orbilia oligospora ATCC 24927
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