Conserved Protein Domain Family
Cut8

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pfam08559: Cut8 (This model is not part of the current CDD release)
Cut8, nuclear proteasome tether protein
In Schizosaccharomyces pombe, Cut8 is a nuclear envelope protein that physically interacts with and tethers 26S proteasome in the nucleus resulting in the nuclear accumulation of proteasome. Cut8 comprises three functional domains. An N-terminal lysine-rich segment which binds to the proteasome when ubiquitinated, a central dimerization domain and a C-terminal nine-helix, pdb:3q5w, bundle which shows structural similarity to 14-3-3 phosphoprotein-binding domains. The helical bundle is necessary for liposome and cholesterol binding. Cut8 is a proteasome substrate and the N-terminal segment is polyubiquitinated and functions as a degron tag. Ubiquitination of the amino N-terminal segment is essential for the function of Cut8. Lysine residues in the N-terminal segment of Cut8 are required for physical interaction with proteasome. In fission yeast the function of Cut8 has been demonstrated to be regulated by ubiquitin-conjugating Rhp6/Ubc2/Rad6 and ligating enzymes Ubr1. Cut8 homologues have been identified in Drosophila melanogaster, Anopheles gambiae and Dictyostelium discoideum.
Statistics
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PSSM-Id: 518341
Aligned: 80 rows
Threshold Bit Score: 155.906
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
A5DSS9        77 KKRKRy----sDDdsEthnethsENNNDTSQEQFkPHNHRDqtasgllhLQQqqlqqqhsllllqqlhyfhgssktKRTk 152 Lodderomyces el...
EDS44271     107 SPRKRslmselSAvpAveq-----qqASPSAKRStPAKGS---------PSHakrmrfeeg------------------- 153
4_pfamImport   2 SPRKRslikelSNtrVseae---tsyPSPTNKRNtPSKGA---------LGSakkirlqeg------------------- 50 
XP_046633136 105 SPRKRlqlnetGEt---------ISMSPPEKMRKlSS------------SSNrkpikl---------------------- 141
1_pfamImport   2 TPRKRlsladnSEsqF----------TTPDKKKKlQNLLDTnssqkyftG------------------------------ 41 
XP_011138388 114 TPRKRlslidiCQseF----------TTPEKKRKtYSLMAEvntsqtqpID----------------------------- 154
XP_032518260 109 TPRKRlllgdnERvpLtpekidfSDISTPQKFKItSPFKD---------SPPikrsrler-------------------- 159
3_pfamImport   1 TPRKRllmgetERipLtpekidfSDISTPQKFKLnNQECSIk------nTPPmkrsrvek-------------------- 54 
XP_002432926 120 SPRKRlllndpKElcL----------SSPEKLTKk--------------VSPtkklrsdkssnslfsgnqnnnnnnNNN- 174
2_pfamImport   2 TPRKRlllndpLEl------------SSPDKYKIg--------------SPSckklrtev-------------------- 35 
A5DSS9       153 ipkIIGQPLPTSRLIESLDKTHLEKLLHSLID--------IHPELNKTIQKITPKPSLENLLLILQDKHAQLIDHLPYk- 223 Lodderomyces el...
EDS44271     154 sinrknrdvPLETLLSGLSQDQLISVITGMVR--------GNARLEETVRSELPVPDLAPLEEQLSYQKKNIFKSLPAtr 225
4_pfamImport  51 smnrskdevPLETLLRGFSQEQLIAMITGMVQ--------TNPRFEEIIRSELPIPDIAPLEEQLCYQKKNICKSLPAtr 122
XP_046633136 142 ----eddpvPLDLVLNGLSRSQLISVIQNLAT--------INEEVKQKLESLLPEPDLQPMLDELSYLKKNIFKSLPNcr 209
1_pfamImport  42 ---------NLLNGLRGLSHNQLVHMIMDLVSmqedgllhNNDKIRNILLKKMPMADIQSLIDILNNLKQNIQVSIGFsd 112
XP_011138388 155 ---------DLMNGLQGLSHEQLVQMIMDMVHmqesgllcKSTTLRNILLKKMPVADIQQLIQKLRVLRQNIYASLIC-- 223
XP_032518260 160 -tfdgefkgPLDTALKGLSPTQLIHMIKRITH--------KHPEVEKEIRSDMPIPDLTPLEEKLSYLKSNIFKSLPTsr 230
3_pfamImport  55 -vldkeyrgPIDTALKGLSPTQLIHIIKNITY--------KHPEVEQELRREMPLPDLSPLDEKLSYLKSNIFKSLPTsr 125
XP_002432926 175 ---MPGPSSTFQSALKGLSQEQLIKIFENVLM--------KHPHLES------VTPDIKPLEDKLIYLKKNIFKSLPNsr 237
2_pfamImport  36 -avelpednCLLSALKSLSPDQLIGIIGQIVI--------DHPSIEKEIRSHFPVADLKPLEERIYYLRRNIYKALPSsr 106
A5DSS9       224 -CSETSDYSYLRIKPYLQEFLSCLEDYVLYYLPSNNysetkhkLIQSLKFIDEATSTIHKLPNFTNSEYQYMRNLTYEQL 302 Lodderomyces el...
EDS44271     226 lVSKTDSPAYARAATHLSSFKKTLVEQAQTLHNAKH-------WDALLDYVPMAWGYVRATPVWDNHAHNAVRRHCFKIL 298
4_pfamImport 123 lVSKTDSPAYARAATHLAAFKKTLIDQGQTLQNSKH-------WDALLDYVLMAWNYVRSTPVWDNYAHNSIRRHCFKIL 195
XP_046633136 210 lSSKTDSAAYNKTSVHLSAFKKRLLDYCKQLVESRQ-------WKSVVEFTLNAWNLVKATPIWDNAQHNSVRKQCFKSL 282
1_pfamImport 113 lNGLSN--------IHLDAFHKAIIDQGKRLVESQH-------WISVMHYVYAAWNITKQLNEKEHQSICNLTHKCFKNL 177
XP_011138388 224 --SNEDNSAYNRAYIHLNTFEKTLIDQGRTLQDSQH-------WISLVHYALAAWEITKELPEWENQGHHNTTRKCFKSL 294
XP_032518260 231 lTSKTDSPAYSRVATHLTAFKKCLVDQGKVLVESQH-------WESVIKYVFLAWNYVRATPLWDNQPHNAQRKQCFKTL 303
3_pfamImport 126 lTSKTDSPAYSRVSTHLAAFKKCVIDQGKVLVESQH-------WESVLHYVFLSWNYVKSTPVWDNQPHNAHRKQCFKAL 198
XP_002432926 238 lTSKTDSPAYSRAATHVVAFKKCVLEQGKTLLESQH-------WNSVLEYVLLAWGYVKATPLWDNPPHNASRKQCFKSL 310
2_pfamImport 107 lISKTDPTAYNRVSTHVLAFKKCVVDQGRRLVESNQ-------WPIVMDYVFMAWKHVRNTPIWDNPAHNAARRQCFKSL 179
A5DSS9       303 INCWLILVNQetncdtgngldYTEFHKIVEELDLLESLKQHGVQSGQegFSKVIEAVQNKLG 364 Lodderomyces elongisporus NRRL YB...
EDS44271     299 AYHATSALKH-----------GLVGLGADRLHRFQQKLKPMAADCED--INDCATYLAYLAE 347
4_pfamImport 196 SYHANTALKN-----------GSTALGKDRIERFHAKLKSMATDCED--INDCHSCLGYLLN 244
XP_046633136 283 STNCLKALK-------------SADGELEWRHEIKKRLERLRGDSDD--LDMCIAYLDTAdg 329
1_pfamImport 178 THFCSQALK-------------KGNFTSTVLDMFADRLDAMVEDYED--LKVCLQLINEVKN 224
XP_011138388 295 SQFCAEAIR-------------RGNFEISDLETYIARFKTISEECEE--FKICLQIAKEAKQ 341
XP_032518260 304 INFCMTALK-------------KGTFDKDYMIDIHDKLQGIESDSED--VQSCLKYVNGQLq 350
3_pfamImport 199 TNFCLTALK-------------KGNFEKDLLIDVQDKLQEMICDSDE--LHSCLKIVQG--- 242
XP_002432926 311 AAMAISALK-------------KGSWCNEELEDIYIRFKKCDSESDD--IQACLKQISSLrk 357
2_pfamImport 180 SAQCITALKH-----------MKDTMNQQSCDNYKNQLKLLVDDSED--IEWCLHFLN---- 224
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