1L2F,2MT4,6J9E


Conserved Protein Domain Family
NusA_N

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pfam08529: NusA_N (This model is not part of the current CDD release)
NusA N-terminal domain
This domain represents the RNA polymerase binding domain of NusA.
Statistics
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PSSM-Id: 518319
Aligned: 426 rows
Threshold Bit Score: 38.1835
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1L2F_A         30 LLEALDQLEEEKGISKEEVIPILEKALVSAYRKNFGNSk-N-VEVVIDRNT-GNIKVYQLL-EVV---EeV--------E 94  Thermotoga mar...
Q9PQH3         10 FIEYFKDTAKQNEIEFEVLSSIIKEAFEKAYLRT---HpgEnFETNIDLKQ-GTINCFRNL-VVVeneKvhnedletcld 84  Ureaplasma parvum
Q8EWU2          6 FLENLDKIAKEKDTSKENIVNILKTALEKSYLKE---NpdLdIEVVVDLNKeS-IKLFEKR-VVVdksE----------- 69  Mycoplasma pen...
WP_015424031    5 MLDALNKLAAIKQLNKDTIQTIILEAVTSTLQKRL--EpeAgLQVYIDELA-GCVKVKFKS-LVVe-rE----------- 68  Candidatus Clo...
Q98R07         30 FFLSLENLSRDKKLKISTVKQIFQEAFFQVIKNDF--DpdAdLEIVYDDEK-KEVTFYNNNaIVIedaLeeadddy---- 102 Mycoplasma pul...
WP_022934958   13 FFQQFEEISNKHNISLEETFQLFATAIEKTILKRI--DpdAdLEIIYDAKK-QIFQVFNKNvEVVendFfdgsv------ 83  Mesomycoplasma...
14_pfamImport   1 ILESLKEIAQQNQTTIDIVLETFSKSIEKVINKKI--DpeAeLELETDFDK-FIFKVYNINgEIVedtYfdnlddl---- 73 
WP_012498481   15 IFKAINDLSKLKNLNTNEVIELFKDAVKKVIM-SYDEd--AeLEFVFDEEN-NEFIVINHT-KYV-----V--------Q 76  Metamycoplasma...
WP_277872465   25 IYKQIYNLSQIKKIDQAEVVEAFKNTVTKLITETYDEe--AdLEFIFDQEN-DNFAIINHN-KVV-----V--------G 87  Metamycoplasma...
WP_013054522   19 wyiiakgYAARNNLSTQQIADIIADETTKAINRDI--DpeAiINFVVDEER-EVVSIINTNaTVVedeFefngd------ 89  Mycoplasma cro...
1L2F_A         95 DP---A-----------TQ-ISLEEAk----K-I--DPLa---eVGSIVKK--ElnVKNFGRIAAQTAKQVLIQRIRELE 147 Thermotoga mar...
Q9PQH3         85 DA---------------VE-ILLDDArkinaN-----AQ-----IGDLIKQhiS--IDNFKSIEVGQIGSLLRQKITEIH 136 Ureaplasma parvum
Q8EWU2         70 DEiddD-----------KE-INISEAqelkkS-----YK-----LGDTVSTevN--IDKFERRITSHFAQILTHNLNDIS 125 Mycoplasma pen...
WP_015424031   69 EG---L-----------GQ-ISLIDAr----NdYyhNVQ-----LGEYIEKtmT--LSEFEPKIVKTVQKIIQDKIRQLE 122 Candidatus Clo...
Q98R07        103 -----------saeemlVSfVRLSDAr---------KEKsd-vqIGDIVKKqiK--HDELKLNEVKKIFSIFQQNLAKEA 159 Mycoplasma pul...
WP_022934958   84 ------------ssyekTIfITEEKAk---------EIYpn-aqIGDIVKIqiN--IDEFEKDIHEPLTQLFKQSISDVT 139 Mesomycoplasma...
14_pfamImport  74 -----------akheasFSfISISDAia------kkIAKpedlqVGNRVKIeiD--ITTFDKSIFQSAIQNFKQTNSEIN 134
WP_012498481   77 DP---ItaedkdmlcrcIE-VPLSIAk----El---KSTa---kEGDVISEtiN--FETFQKKDYIRILQSFNQSIRELE 140 Metamycoplasma...
WP_277872465   88 DP---ItseekdrltrcIE-IPLSDAk----Ki---DPNa---eIGDSLSQeiN--FEYFSKKDYNKILANFSQDIKNLE 151 Metamycoplasma...
WP_013054522   90 ------------qdvqkISfVPISKAk---------KVKks-veIDDAIDWeiD--FEIFNEKTKTAIKNGFIQQLKANE 145 Mycoplasma cro...
1L2F_A        148 K 148 Thermotoga maritima
Q9PQH3        137 N 137 Ureaplasma parvum
Q8EWU2        126 N 126 Mycoplasma penetrans
WP_015424031  123 E 123 Candidatus Cloacimonas acidaminovorans
Q98R07        160 k 160 Mycoplasma pulmonis
WP_022934958  140 R 140 Mesomycoplasma bovoculi
14_pfamImport 135 R 135
WP_012498481  141 K 141 Metamycoplasma arthritidis
WP_277872465  152 R 152 Metamycoplasma hominis
WP_013054522  146 K 146 Mycoplasma crocodyli
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