6BMB,1O9B,2HK8,1P77,4FPX,3U62


Conserved Protein Domain Family
Shikimate_dh_N

?
pfam08501: Shikimate_dh_N 
Click on image for an interactive view with Cn3D
Shikimate dehydrogenase substrate binding domain
This domain is the substrate binding domain of shikimate dehydrogenase.
Statistics
?
PSSM-Id: 400688
View PSSM: pfam08501
Aligned: 37 rows
Threshold Bit Score: 88.8094
Threshold Setting Gi: 24211475
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6BMB_A 239 IIGKPVSHSKSPIVHNQAFKSVDFNGVYVHLLVD--NLVSF-LQAYSS---SDFAGFSCGIPHKEAALQCCDEVDPLAKS 312 thale cress
Q895Z4   6 LLGKNISYSQSPKIHNEYYEKNNIPFKYKIFDVNedELFYF-IDTLYR---KNIVGFNVTIPYKTKILKYIEKLVYPADK 81  Clostridium tetani
Q96Y95  13 VVGENISYTLSPAIHNYSFQELGINAVYLAFDIKsdEFKEI-FPGLVK----IAYGLNITIPYKEIAIKYVE-AQSEAKR 86  Sulfurisphaera tokoda...
Q9AC57  14 VCGQPIKHSMSPVIHNAWIAAAGLDAAYVPFAPAadRFETF-VDGLRG---GAVRGLNVTIPFKERALAVADTASDLARM 89  Caulobacter vibrioide...
Q9PFN3   8 VFGHPIAHSLSPRIHTEFGRQMGVALNYLAFDVApdAFRVS-LERFVA---EGGCGANVTLPLKEAAFEVCTTLSARARR 83  Xylella fastidiosa 9a5c
Q89GF3   7 VIGNPIGFSKSPLIHGTFAKMTGQDLVYEAIEAPldGFNAR-VDQFRR---EGAKGLNITAPFKLDAFAYANELSESADR 82  Bradyrhizobium japonicum
1P77_A   6 VWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDldAFEQQ-LLAFFE---EGAKGCNITSPFKERAYQLADEYSQRAKL 81  Haemophilus influenzae
Q83GD4   7 VLGLPVSHSLSPKIHSLAYDLLGLPFRYVAKEMTidGFRDF-VSKIID---EDYRGLSVTMPLKFLAATCADRLSNLVRR 82  Tropheryma whipplei s...
Q8F8C0  14 IVGFPLSHSLSPLIHNSIYKDRNINASYLVFETQ--NLNVEkIQEFRN---SGILGLSVTIPHKETAFTLADKADDTSRI 88  Leptospira interrogan...
Q8UJC5  14 VVGYPIKHSRSPIIHSYWLKKFGIAGSYTAVEVSpdDFPKF-IATLKEgkpGAAVGGNATIPHKEAAYRLADHPDALAEE 92  Agrobacterium fabrum ...
6BMB_A 313 IGAVNTI 319 thale cress
Q895Z4  82 IGAVNTV 88  Clostridium tetani
Q96Y95  87 IGAINTI 93  Sulfurisphaera tokodaii str. 7
Q9AC57  90 AGAANLL 96  Caulobacter vibrioides CB15
Q9PFN3  84 AGAVNTL 90  Xylella fastidiosa 9a5c
Q89GF3  83 AGAANCL 89  Bradyrhizobium japonicum
1P77_A  82 AEACNTL 88  Haemophilus influenzae
Q83GD4  83 CGVANTL 89  Tropheryma whipplei str. Twist
Q8F8C0  89 MKASNTL 95  Leptospira interrogans serovar Lai str. 56601
Q8UJC5  93 LGAANTI 99  Agrobacterium fabrum str. C58
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap