Conserved Protein Domain Family
SRP72

?
pfam08492: SRP72 
SRP72 RNA-binding domain
This region has been identified as the binding site of the SRP72 protein to SRP RNA.
Statistics
?
PSSM-Id: 400680
View PSSM: pfam08492
Aligned: 26 rows
Threshold Bit Score: 40.7882
Threshold Setting Gi: 70833407
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_014170617  596 KKRSRDADETAanTPLAKKaktpatlsRQARKLQAKDAATFD---AAKTPDAERWLPLRDRSSYRP 658  Grosmannia clavigera kw1407
XP_016758646  536 QPPSSSVPKSLkrPAEDTKp------kKAKKARKSRLPKNYD---PNKKPDPERWLPLRDRSTYRP 592  Sphaerulina musiva SO2202
EFY87458      545 GSKKRRSPTAPrsEr------------PSQRRKRIRLPKNFV---EGQTPDPERWLPLRDRSTYRP 595  Metarhizium acridum CQMa 102
XP_018152349  542 ESKKRRLDAQPteTI-------------NKKKRRRKLPKDYV---EGKKMDPERWLPLRDRSSYRP 591  Colletotrichum higginsianum...
EMR90085      547 sskKRALDDKEkeNEDPAKk------qKTIGTRKSKLPKDFE---EGKKMDPERWLPLKDRSSYRP 603  Botrytis cinerea BcDW1
Q9FXD1        538 KPIEGISAASLsqEEVKKE--------KVKRKRKPKYPKGFDlenSGPTPDPERWLPRRERSSYRP 595  thale cress
P91240        516 QKKEAKSPQTAeiAATRKLk------iATKRKRKIRLPKNYN---SAVTPDPERWLPRQERSTYKr 572  Caenorhabditis elegans
PDM75886      520 rKEAKEGIEKAdtEIVTGKl------rKRKRKRTI-LPKNFD---PNVKPDPERWLPKEERTAYKK 575  Pristionchus pacificus
XP_015784341  532 KKITKVEPSPGniKEDIKK--------TKKRKKKKQLPKKFD---PDVDPNPERWLPRWQRSTYKK 586  two-spotted spider mite
Q5CY17        566 EKDSHDSKSMShaNLTIKTk-------SKHKKRKPRYPKGFDplnPGQEPDPERWLPKEQRSSFKK 624  Cryptosporidium parvum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap