Conserved Protein Domain Family
EcoEI_R_C

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pfam08463: EcoEI_R_C (This model is not part of the current CDD release)
EcoEI R protein C-terminal
The restriction enzyme EcoEI recognises 5'-GAGN(7)ATGC-3' and is composed of the three proteins R, M, and S. The domain described here is found at the C-terminus of the R protein (HsdR) which is required for both nuclease and ATPase activity.
Statistics
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PSSM-Id: 518273
Aligned: 157 rows
Threshold Bit Score: 60.3473
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EHQ36413     735 TVANFRKFIEE-NRDSVTALQIIYSrphkeRHLTFEQIKELSEIlseppyGFTPDNVWAAYEKVekdrvrganPHrmlTD 813 
WP_013158514 137 ATPQLRD-----SLPDEERFRELWCn----RKSREALLRSLKNR------GWGEEQLERLREWSgag---------drvD 192  Allomeiothermu...
CDB04018     626 ITDYTRKNIND-TYVNLDDFINHWNa----AEKKAEITDLMRES------GIDLQALKIERnm---------eNV----D 681 
Q8EUU6       467 FEVDARDYILK-EFGQYNDFLNFWKd----KDKRVIILNELENK------GFFIKKIRELF------------NSdssVD 523  Mycoplasma pen...
WP_013325189 633 LVDYTKEQVRT-LYRSSIEIQQRWId----TERRSEIIEQLGDR------GIDFEDLKQVTnq---------pEA----D 688  Gloeothece ver...
WP_015173494 642 LVDFTREEVRT-LYRSSVEIQQRWVd----PGQRSEILDLLAER------GINFEDLKEVAgl---------pDV----D 697  Geitlerinema s...
WP_015203563 638 lIDYTREQVRT-LYRSTLEIQQRWAd----PEQRSEIIELLADR------GIDFDELKQVTnf---------pDA----D 693  Crinalium epip...
EHR71010     650 YTEYSGRAVRT-LYPTREALQSAWAd----PDTRSEVLRELTER------GISFEELASSSeq---------pDA----D 705 
WP_012596239 718 YLDYTKAKIRG-YVPNWSQLHQIWId----SEQRKLLLRELTTA------SVYIEVLGEVLaq---------pKA----D 773  Rippkaea orien...
WP_012174681 591 YTEQSRNFILDvSAKSLDELLTIWId----KNSRKELREELRDH------DIYPSAFRHYLELPk-------------tD 647  Desulfosudis o...
EHQ36413     814 IISLVRFTIGSDYyLEPFSETVEHRFERWIkeresayakgstndsdtnttgnkshtinntnktnetnrsgKFT------- 886 
WP_013158514 193 LFDLIGHLGYG-WpLLKRSERATACMNR------------------------------------------LWD------- 222  Allomeiothermu...
CDB04018     682 DFDFICHIAYG-KkPLTRKERAENVKKR------------------------------------------DVFnr----- 713 
Q8EUU6       524 DFDLLCKIAYG-MkPITRKERANKPKVI------------------------------------------EILdq----- 555  Mycoplasma pen...
WP_013325189 689 PFDLLCHIAFD-ApIMTCKQRAEQLKRKGK----------------------------------------SFFeq----- 722  Gloeothece ver...
WP_015173494 698 PLDLLCHIAFD-EpALTYRQRAEKLKRRSP----------------------------------------DIFtr----- 731  Geitlerinema s...
WP_015203563 694 PFDLLCHIAFD-ApVLTCKQRAERLRRSNA----------------------------------------DFFeq----- 727  Crinalium epip...
EHR71010     706 PFDLLCHLAWN-ApLLTRRQRAEQARRQAA----------------------------------------NLFaq----- 739 
WP_012596239 774 QFDLLAHIAF-NKpIHTRDERVEAFLNYEQ----------------------------------------WYLea----- 807  Rippkaea orien...
WP_012174681 648 DVDILAKIGFNLVrVPTRPQRVERFWKDEA----------------------------------------QWLeyelgan 687  Desulfosudis o...
EHQ36413     887 ----------------------------PEQMEWL--NIIKDHISTSISISP---DDFEYNQr-LIQK-GGLISAY-RAF 930 
WP_013158514 223 ----------------------------HPHADIC--YYLLHVYTQKGLEAMq-pLDILDTPeaKDRGlGGSDKVLaKV- 270  Allomeiothermu...
CDB04018     714 --------------------------ygAEARKVL--EALLDKYANDGISQLe-nRMVLKLDp-FRQM-GSPANIAk-LF 761 
Q8EUU6       556 --------------------------qpEERRKIL--EVLLEQYSNGNLQDFa-dENNLKLKe-INNK-WSIIEVIe-IF 603  Mycoplasma pen...
WP_013325189 723 --------------------------ygQEARAIL--EILLENYAQGGPQQFv-lPAALKVKavEERF-GNIREISn-KF 771  Gloeothece ver...
WP_015173494 732 --------------------------ygEDARVIL--ETLLDKYAEHGVSELd-vPTTFKVN--FPGY--NLQEIAd-KF 777  Geitlerinema s...
WP_015203563 728 --------------------------ygEYARAIL--EILLDKYAEKGVEEFn-iPTTFKANreFDKY-GNVAEIAq-RF 776  Crinalium epip...
EHR71010     740 --------------------------ysDTAREIL--TLLLDRYVERGILQFnalSELIKVQp-FDRY-GSPSEIAtRHF 789 
WP_012596239 808 --------------------------qtEEAREVI--LGLLDKYRLAGIEEIv-nPEVFRLSp-FQEM-GQIKGVIl-RL 855  Rippkaea orien...
WP_012174681 688 rvnkaqvfsfpksqpmdkvadpepgyrsSDPFKVLfwQCALDHYQLFGIDDLe-qARTYGAPqfVAQF-GSFQTLTs-RY 764  Desulfosudis o...
EHQ36413     931 GD--DLNTIMAELNEAL 945 
WP_013158514 271 GGlkAYLQLLDSLEDQL 287  Allomeiothermus silvanus
CDB04018     762 GGnkQYFSAVKELENLI 778 
Q8EUU6       604 GGknNYTDAVNDIHNAL 620  Mycoplasma penetrans
WP_013325189 772 GGaeQLKKAIEQLQSLL 788  Gloeothece verrucosa
WP_015173494 778 GGveRLQAAMLQLQNLL 794  Geitlerinema sp. PCC 7407
WP_015203563 777 GSvqELKEAIKKMQSLL 793  Crinalium epipsammum
EHR71010     790 GGvrGMKDAVSRLQGAL 806 
WP_012596239 856 GTmeNLRQIFREIQQKL 872  Rippkaea orientalis
WP_012174681 765 GGpqLLKTDLEAVKHHL 781  Desulfosudis oleivorans
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