Conserved Protein Domain Family
Calici_PP_N
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pfam08405: Calici_PP_N 
Viral polyprotein N-terminal
This domain is found at the N-terminus of non-structural viral polyproteins of the Caliciviridae subfamily.
Links
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Statistics
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PSSM-Id: 489587
Aligned: 2 rows
Threshold Bit Score: 761.175
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q83883  183 RSTTPATEPTIGDMIEFYEGHIYHYAIYIGQGKTVGVHSPQAAFSITRITIQPISAWWRVCYVPQPKQRLTYDQLKELEN 262  Norovirus Hu/1968/US
Q83883  183 RSTTPATEPTIGDMIEFYEGHIYHYAIYIGQGKTVGVHSPQAAFSITRITIQPISAWWRVCYVPQPKQRLTYDQLKELEN 262  Norovirus Hu/1968/US

Q83883  263 EPWPYAAVTNNCFEFCCQVMCLEDTWLQRKLISSGRFYHPTQDWSRDTPEFQQDSKLEMVRDAVLAAINGLVSRPFKDLL 342  Norovirus Hu/1968/US
Q83883  263 EPWPYAAVTNNCFEFCCQVMCLEDTWLQRKLISSGRFYHPTQDWSRDTPEFQQDSKLEMVRDAVLAAINGLVSRPFKDLL 342  Norovirus Hu/1968/US

Q83883  343 GKLKPLNVLNLLSNCDWTFMGVVEMVVLLLELFGIFWNPPDVSNFIASLLPDFHLQGPEDLARDLVPIVLGGIGLAIGFT 422  Norovirus Hu/1968/US
Q83883  343 GKLKPLNVLNLLSNCDWTFMGVVEMVVLLLELFGIFWNPPDVSNFIASLLPDFHLQGPEDLARDLVPIVLGGIGLAIGFT 422  Norovirus Hu/1968/US

Q83883  423 RDKVSKMMKNAVDGLRAATQLGQYGLEIFSLLKKYFFGGDQTEKTLKDIESAVIDMEVLSSTSVTQLVRDKQSARAYMAI 502  Norovirus Hu/1968/US
Q83883  423 RDKVSKMMKNAVDGLRAATQLGQYGLEIFSLLKKYFFGGDQTEKTLKDIESAVIDMEVLSSTSVTQLVRDKQSARAYMAI 502  Norovirus Hu/1968/US

Q83883  503 LDNEEEKARKLSVRNADPHVVSSTNALISRISMARAAL 540  Norovirus Hu/1968/US
Q83883  503 LDNEEEKARKLSVRNADPHVVSSTNALISRISMARAAL 540  Norovirus Hu/1968/US
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