Conserved Protein Domain Family
RAP

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pfam08373: RAP 
RAP domain
This domain is found in various eukaryotic species, where it is found in proteins that are important in various parasite-host cell interactions. It is thought to be an RNA-binding domain. The domain is involved in plant defense in response to bacterial infection.
Statistics
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PSSM-Id: 400602
View PSSM: pfam08373
Aligned: 64 rows
Threshold Bit Score: 40.2583
Threshold Setting Gi: 74864026
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
A0BQD8         489 IEVNGPHHYcsivgdtlpndavqHLSTnQAMYe----tLKTSLKTRLLQQKGYRVINIPYFKWNGWciSNKQDKI---LN 561  Paramecium t...
XP_001616073  1287 FEFLEEENY--------------FKEVdDASIev---lPFVYLRLFFWRKLNYSLVIMPFYEWHMC--YGRLERVk-aIF 1346 malaria para...
Q4UIM8         501 IEVDGPYHYsttinp---rinkiLKREvDNYRlg--ytLNSKLKSRILTKSGFKFINIPFYQWPQT----TNEQVy-fIS 570  Theileria an...
XP_001610322   570 IEIDGPYHFnttlns---slnsiLNRHvDDYRlt--ytYNSRIKMYMLRQGGYKVIHIPYFMWPSG----KQEQMv-yAK 639  Babesia bovi...
jgi:Fnod_1356 1047 VEVDGVHHF--------------VEDG-RNYS------ESHIERMEMLRRAGWKIINTPYYKWYNHgwLDENSEI---LK 1102 Fervidobacte...
Q4UGT1         452 IEIDGPYHYnilldeqncdgegiIRYGnINLRl----nGKTIYRNNILSKLGYKLVSIPWFVIHQY----NNDNVynyVK 523  Theileria an...
Q7RP27         851 ICVYGKEH---------------LMRTlANSHwdymntGFTSLQMRILASHGWKIIPINGGEWLKL---NTEQKKt-yLQ 911  Plasmodium y...
EDL44070       848 ICVFGKEH---------------LMRTlETASwdhmnsGFVSLQMRVLHAHGWKIIPINGGQWLQM---NSEQKEa-lLR 908  malaria para...
Q8I3U8        1014 VSIFGKEY---------------LMRTlKKSSwdfmntGIVTLQMRILHAHGWKIIPINAGEWLQL---NFDQKKn-lLS 1074 Plasmodium f...
EWS76062       419 VEVNGRFHY--------------VHNR---YS------GVYQIKHTCLEKQGYIIIEIKDYDWYAL---KENEKEl-yIA 471  Tetrahymena ...
A0BQD8         562 DM 563  Paramecium tetraurelia
XP_001616073  1347 QK 1348 malaria parasite P. vivax
Q4UIM8         571 NL 572  Theileria annulata
XP_001610322   640 RC 641  Babesia bovis T2Bo
jgi:Fnod_1356 1103 RE 1104 Fervidobacterium nodosum Rt17-B1
Q4UGT1         524 DV 525  Theileria annulata
Q7RP27         912 EY 913  Plasmodium yoelii yoelii
EDL44070       909 EN 910  malaria parasite P. vivax
Q8I3U8        1075 EY 1076 Plasmodium falciparum 3D7
EWS76062       472 Kl 473  Tetrahymena thermophila SB210
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