Conserved Protein Domain Family
RAP
?
pfam08373: RAP (This model is not part of the current CDD release)
RAP domain
This domain is found in various eukaryotic species, where it is found in proteins that are important in various parasite-host cell interactions. It is thought to be an RNA-binding domain. The domain is involved in plant defence in response to bacterial infection.
Links
?
Statistics
?
PSSM-Id: 518221
Aligned: 56 rows
Threshold Bit Score: 45.67
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
A0BQD8       489 IEVNGPHHYcsivgdtlpndavqHLSTnQAMYe--tLKTSLKTRLLQQKGYRVINIPYFKWNGWciSNKQDKI---LNDM 563 Paramecium tetr...
Q4UGT1       452 IEIDGPYHYnilldeqncdgegiIRYGnINLRl--nGKTIYRNNILSKLGYKLVSIPWFVIHQY----NNDNVynyVKDV 525 Theileria annulata
Q4UIM8       501 IEVDGPYHYsttinp---rinkiLKREvDNYRlgytLNSKLKSRILTKSGFKFINIPFYQWPQT----TNEQVy-fISNL 572 Theileria annulata
Q6DI86       763 IELLDVRAF--------------CSNI-PHLK----GKSAMKKRHLEILGYRVIQIPYFEWNSMamSTKDARMd-yLREH 822 house mouse
Q28DE0       767 IEFLDSKAF--------------SKNS-SNIK----GEYVMKKRHLEILGYHVVQIASFEWNSMelSTKDAWId-yLRKR 826 tropical clawed...
Q5M7V7       609 VLCVPKSAY--------------CLNS-NHLR----GLMAMKIRHLNVMGFHVILIHNWELKKL---KMEDAVt-fVRKK 665 Norway rat
Q9NYY8       636 VLCVSRSAY--------------CLGS-SHPR----GFLAMKMRHLNAMGFHVILVNNWEMDKL---EMEDAVt-fLKTK 692 human
DAA32478     614 vlCVPKSAY--------------CLDS-THPK----GYLAMKMRHLKIMGFHVILVNNWEVEKL---EMKDAVa-fLKTk 670
XP_003961974 766 IDFLDSKCF--------------CKNS-HHIK----GETLMRKRHLEILGYRVVQIPHFEWNSMelSTQDAWKe-yLKRK 825 torafugu
XP_029695199 563 flaweFPNF--------------CSKS-RDLL----GRFAMMKRHLQLAGFITVEVPYYEWLEL--KTDRQKVa-fLKDK 620 torafugu
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap