3JCN


Conserved Protein Domain Family
IF2_assoc
?
pfam08364: IF2_assoc (This model is not part of the current CDD release)
Bacterial translation initiation factor IF-2 associated region
Most of the sequences in this alignment come from bacterial translation initiation factors (IF-2, also pfam04760), but the domain is also found in the eukaryotic translation initiation factor 4 gamma in yeast and in a hypothetical Euglenozoa protein of unknown function.
Links
?
Statistics
?
PSSM-Id: 518214
Aligned: 70 rows
Threshold Bit Score: 34.8365
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
3JCN_b                     56 PDKLTLQ----RK-TRSTLNIPGTGGKsKSVQIEVRKKRTFVKR 94   Escherichia coli
Q2NC10                     11 RKPLGLK----RSvDAGEVKQTFSHGRtNKVAVEVKRKRKLLKP 50   Erythrobacter litoralis HTCC2594
A8IG20                     17 GKTLTLK----RPvEQGTVRQSFSHGRsKSVVVEKVKRRVFAPg 56   Azorhizobium caulinodans ORS 571
WP_013655018               16 RKTLGLKr---GGvEQGTVRQSFSHGRsKAVVVEKKKRRIVVPg 56   Polymorphum gilvum
Q0AK69                     12 RRPLSLK----RS-GGGTVQQSFARGRsKAVVVEKKRKRVATPa 50   Maricaulis maris MCS10
B4RC55                     16 RQPLTLKpraaGSvSSGTVKQSFSHGRtKTVVVETKRARTHAPA 59   Phenylobacterium zucineum HLK1
PRJNA212980:JCM7686_2997   11 KKPLGLGg---GAgRSGSVKQSFSHGRtHNVVVETKRKRVVVPg 51  
A8LQ56                      7 KKTLGLR----GGsRTGQVKQSFSHGRtKNVVVETKRKRVLVPK 46   Dinoroseobacter shibae DFL 12 = DSM 1...
Q28WF7                      7 KKPLGLS----GGaRSGRVNQSFSRGRtKSVVVETKRKRVMVPK 46   Jannaschia sp. CCS1
WP_023786913               17 RKPLSLQ----RTvESGHVRQSFSHGRsKSVVVEKRKTRKLAtp 56   Hyphomicrobium nitrativorans
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap