Conserved Protein Domain Family
YscJ_FliF_C

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pfam08345: YscJ_FliF_C (This model is not part of the current CDD release)
Flagellar M-ring protein C-terminal
This is the RBM3/beta-collar domain found in bacterial flagellar M-ring (FliF) proteins which also have the YscJ/FliF domain (pfam01514) at the N-terminal.
Statistics
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PSSM-Id: 518200
Aligned: 309 rows
Threshold Bit Score: 34.8683
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q0JYM4         250 LTPIVGKDNVRAQVTADVDFSIVEHTDESY--------KP-----N-QDptrsaIRS-QQTs-----eSTQQ---Gvtpp 306 Cupriavidus n...
Q3ADE4         254 LTTILGPGKAVVSINADLDFNQEETTSQIAl------pGP--------------LVS-EQGskevvygSPGAs------- 305 Carboxydother...
BAF60270       255 LTQIMGQNKAVAMVTADLDFNQQQTTSTVSs-------NPnnlriSeHI-----VREtg--------gGTEAg------- 307
jgi:Desca_1798 258 LTKLLGPNKAVAMVTADLDFNQQQTNTTEVl------pGP--------------VVSeRSTkes--gnDAGGg------- 308
WP_011878716   259 LAKVLGPNKAVAMVTAEMDFNQLQTNTTEV--------VP-----Gq-------VVSeRSIkeq--gsDGSGg------- 309 Desulforamulu...
WP_012302840   252 LQRIVGPDRVVVMVSADLDFSQQQSVSTVPy--------------GeAQ-----VVS-EQTvreesegSGTGg------- 304 Candidatus De...
WP_015756320   256 LDRVLGTDKAVSMVTAEMDFNKQEINTTTH--------GP-----GqKV---------SEQlineksqGTGLg------- 306 Desulfofarcim...
WP_011754233   252 LDRVLGPGNSTVQVTADLDFDKSVSESTTYgks---nkVP--------------ALS-SSTste--kyDGPAggsSs--- 308 unclassified ...
14_pfamImport    1 LAKLYHMENVEVAVRGKLDTSTLLSENTQYt-------VPvqadsTdKEg---lLDHeEDAsaytgpgAATAa------- 63 
9_pfamImport     1 LGPVYGAANVQVSPAAILDFTTTTTNTTTYsgpdngqgFP-------SS-----VSS-SITvsg--gtGTASg------- 58 
Q0JYM4         307 gGVPGAL-SNQPpaaaaapvttpqtpragqapgqagapaagqpgqpgqaaqpgqgaqvanatassGP-----------SS 374 Cupriavidus n...
Q3ADE4         306 -GTVGTG-PNTN-----------------------------------------------------QNypyingstngeVQ 330 Carboxydother...
BAF60270       308 -GPPGTD-SNLS------------------------------------------------------Typalq-gagttNY 330
jgi:Desca_1798 309 -GTAGST-AQMP------------------------------------------------------GqsvpginngqsSY 332
WP_011878716   310 -GVTGST-TQMP-----------------------------------------------------GQsipaetstsqnSY 334 Desulforamulu...
WP_012302840   305 -GVPGTD-ANLPaty------------------------------------------------plAGrpada--gaptSF 332 Candidatus De...
WP_015756320   307 -GVTGTDaQNTQtyptg--------------------------------------------------------tdnveSA 329 Desulfofarcim...
WP_011754233   309 sGVVGPD-GQMD-----------------------------------------------------SFgatga--ggksSY 332 unclassified ...
14_pfamImport   64 -GVAGTD-ANADtp-------------------------------------------------ryTTengan--gdeySS 90 
9_pfamImport    59 -GTVGVN-GAQPay--------------------------------------------------pTSgsqts--slsgTV 84 
Q0JYM4         375 NRRDSTVNYELDRSVRHVQQAPGGVRRLSVAVVVNyrqqadakgkLVAEPLPPALLAQIQNLTKEAMGFSADRGDS-INV 453 Cupriavidus n...
Q3ADE4         331 VKEDFTRNYQVGQTVYKLVKAPGTVKRLSAAIAID-------------SGVPAADVNKIRDIVAAAMGYDQNRGDQ-III 396 Carboxydother...
BAF60270       331 SREESTINYQVNTVQETVVKAPGTVRRLSASVVLN----------ETDGPVD---VQKVRDVVAAAIGYDQARGDQ-INV 396
jgi:Desca_1798 333 TKSDDIKNYQNGTRVQSVVQAPGKVLRLSTAVVLD-------------ESVKNLDKTQIQDIVTAAIGFNPQRGDQ-ITV 398
WP_011878716   335 IKTDDTKNYQHGTRTQSEVQAPGKLIKLSTAVVLD-------------ESVKNLDRTQVEKIVTAAIGFDDQRGDQ-ITV 400 Desulforamulu...
WP_012302840   333 VREERTANYQVGTLQQTVIQPPGEVRRLSTSVVVD-------------GDLSAARAEQIQGVVTAALGYNPERGDQ-ILV 398 Candidatus De...
WP_015756320   330 SRDESITNYQVDTTQQKVVQPPGTIKKLSTSVVVD-------------GKLSATRIQQIESLVSTAIGYDQARGDQ-INV 395 Desulfofarcim...
WP_011754233   333 VKESTTSDNAVEKTIEHRETAPGSINTLHVGVVLDt---------TAAQTVNPTD---VQDLIAATVGINPDRGDT-VQV 399 unclassified ...
14_pfamImport   91 FDTSTSRQWLYNTLKEQVQRNPGTLQDCTVAVVID----------TEDTSVDEND---LINLVADAAGISREDAPEkITV 157
9_pfamImport    85 TQQNTNTTYLYNQVQQQVQDKGGSIKNLTIGIMLN----------SANQAIAGLDPTQVQQFVAYAVGTAP------QNV 148
Q0JYM4         454 VNSPF 458 Cupriavidus necator H16
Q3ADE4         397 NTITF 401 Carboxydothermus hydrogenoformans Z-2901
BAF60270       397 SSMAF 401
jgi:Desca_1798 399 STMTF 403
WP_011878716   401 SAMTF 405 Desulforamulus reducens
WP_012302840   399 APMAF 403 Candidatus Desulforudis audaxviator
WP_015756320   396 TNIAF 400 Desulfofarcimen acetoxidans
WP_011754233   400 TTMPF 404 unclassified Nocardioides
14_pfamImport  158 ----V 158
9_pfamImport   149 -NVQL 152
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