6CUD


Conserved Protein Domain Family
TRP_2

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pfam08344: TRP_2 
Transient receptor ion channel II
This domain is found in the transient receptor ion channel (Trp) family of proteins. There is strong evidence that Trp proteins are structural elements of calcium-ion entry channels activated by G protein-coupled receptors. This domain does not tend to appear with the TRP domain (pfam06011) but is often found to the C-terminus of Ankyrin repeats (pfam00023).
Statistics
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PSSM-Id: 400580
View PSSM: pfam08344
Aligned: 46 rows
Threshold Bit Score: 74.1395
Threshold Setting Gi: 641664630
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6CUD_A        182 CKCGD-CMEKQRH-DSFSHSRSRINAYKGLASPAYLSLS--SEDPVLTALELSNELAKLANIEK 241 
ESN92393       46 CTCPE-CEMMEDV--SLIEAKTRYTEFKCLASPPYVILS--TFDPLLYMFRLNSVLKAESKTEP 104  Helobdella robusta
ESN92395      186 CDCED-CKNISER--SLIEALSRQHEYRALASSAYITVS--SIDPIIHTFRLYSDLLEESELDP 244  Helobdella robusta
EKC19479      214 CNCQE-CSNKLVF-DQLRLAKTRLNAYRGLASSAYISLS--SNDPILTAFELARELRCVAKVEK 273  Pacific oyster
EDO45311       32 CRCEE-CQA-----DNFRESQRRLDIYRGLANPVFISMT--SNDPFLTAFELSSELEVIARRED 87   starlet sea anemone
XP_002428580  546 CKCDA-CKADLKKyDRLKYSTMKLNLYKAICNPMYIFHT--RDDPFQRAFELTKELQDAATVFP 606  human body louse
XP_008192937  196 CRCMD-CKAQLERdDLLHAEHLRLNLYKSVCNPAYICHS--SRDPILTSFQLSTELRQCSFLVP 256  red flour beetle
EGI60304      168 CNCDEvCKPEREKvDIVTLEKMRLFIYSAISNPIYLCQT--EEDPILKAFQLSAEFSKEASFDK 229  Panamanian leafcutter ant
EFN65371      168 CNCEEiCKPERERsDILTIEKMRLFMYSAVSNPVYICQT--EEDPILRAFELSAELSREASFDR 229  Florida carpenter ant
XP_008183081   95 CTCSDqCVAAATRgDVVADSSERLNGYWSISDPTFMCTTssSSDPVLECFRLYEELLQCGSTEQ 158  pea aphid
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