3EBB


Conserved Protein Domain Family
PUL

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pfam08324: PUL (This model is not part of the current CDD release)
PUL domain
The PUL (PLAP, Ufd3p and Lub1p) domain is a novel alpha-helical Ub-associated domain. It directly binds to Cdc48, a chaperone-like AAA ATPase that collects ubiquitylated substrates.
Statistics
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PSSM-Id: 518185
Aligned: 163 rows
Threshold Bit Score: 60.0646
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3EBB_A        45 PKKEAVTFDQANPTQILGKLKELn-------gTAPEEKKLTEDDLILLEKILSLIcnsssekp----tvqqlqilWKAI- 112 human
XP_001350346 621 TILNVITIQQAALDKILDKIKEFnsi----llQQNNQYKLNNDEINSISNIIKIYktniktsyl--fnttdinvtTKIF- 693
Q7RCI1       569 TVLNVFTIQTASLDKILQKIKEFnts---tsvKEQNNYKLSENELNNLTNIINVYkknikndyi--fntadinliTKLC- 642 Plasmodium yoel...
Q23TB4       478 PLNQFQYYEQKNLEGLKKKVLEFneal-kaenH---PLHLVEKQVIYFNTMIDMLektnmyhtsr-lnynemevfTVKLi 552 Tetrahymena the...
XP_004030081 484 TVSNLNYYEQMNIEGMKKKFNEInlil-kdtdH-----YLNDKQLFSLNFMLDMLqktnmyhnsk-lsqpqlevfTLKLl 556
EGT34984     597 GLS-------GKGEKAVAKLKELne--------kQDAFQLSTDQINCLEELFHLAttsny----------ssdvaQSAFd 651
1_pfamImport   2 GLT-------GKGEKAVAKLREFne--------kQDAFQLNPDQLNCLEELFLLPassny----------ssdlaQSALe 56 
XP_020433330 228 mNYKAVLFEKGDIEPVATKLTEFvknv------paidFEEYQKKIQTIQPILKSNdtniaipidlikyfgklieiENLTn 301
Q54CK2       217 lnSKSVLFEKSDVEAVFNKLKEFankefkgkeNEQLLITQYEKESNQLKQIMKSVdvdtpis------ietlkyfDGLLs 290 Dictyostelium d...
XP_001616416 573 TVLNVFTVEKAALDKIFQKIQEFnsl---qggEEKNTCKLSNEQVNALSNIINLYkknlknvys--fntadinliMTLF- 646 malaria parasit...
3EBB_A       113 ---NCPEDIVFPALDILRLSIKHPSVNENFCne-----kEgaQFSSHLINLlNPKgk----------paN------QLLA 168 human
XP_001350346 694 ---NWSSDHIFPIIDLFRILVLN--KNCDFLynnkysfnAf-KLVYDCISYyINNydnqnh--tnkldsL------LLCS 759
Q7RCI1       643 ---NWQPAHIFPVIDLFRVLILNKH--SDILfnnkysfnAf-KLVYDCILYyFQNkndkd----knldpL------LVCC 706 Plasmodium yoel...
Q23TB4       553 ---NWPKQYMLPIFDLFRIFALHPQSDALFSgvdsglhyFt-VICGGLMS-------------------EenndvtKNVI 609 Tetrahymena the...
XP_004030081 557 ---KWPQEHILPVLDLFRIFALHPQSDSLFTgvdsglnyFt-ILIGGLGSLne---------------------igKGLI 611
EGT34984     652 talQWPVEHLAPVLDFFRVALTHESLNSYFCtgergqdlVm-KIIAILVS-------------------DpadmvlKVMV 711
1_pfamImport  57 talQWPVEHMTPVLDFFRIALMHESLNSYFCtnergvelVg-RLIAILVS-------------------DpndlglKVLV 116
XP_020433330 302 ---QLPETNIFPVLELIRFLMLKKQSFEYFTnts-------npFISIFINRiLISnls---------------kssELIA 356
Q54CK2       291 ---TFSDDHQFPLLEILRMLLLKNQSNQYYTnqs-------npIISNILLKiQSKkls---------------kpsELLS 345 Dictyostelium d...
XP_001616416 647 ---NWSPTHIFPVIDLFRVLVLNKN--CDFLynnkysfnGf-KLVYDCVAYyIANssklpeneenkldsL------LLCC 714 malaria parasit...
3EBB_A       169 LRTFCNCFVGQAGQKLXXS-------------QRESLXSHAIELKSGS----NKNIHIALATLALNYSVCFhkdHNIEGK 231 human
XP_001350346 760 LRFYLNMFYLSTPRYFMFK-------------KYNFVLKQINQIqs-----kNNNIILLLFRIFFNYIITLn---ENNDK 818
Q7RCI1       707 LRFYLNMXNLSTPRYYMFK-------------KCNLILKQFANFks-----nNLNINILLIKIFXNFVISLn---ENNDN 765 Plasmodium yoel...
Q23TB4       610 LKILVNLFNQTSGRYGIYK-------------HHKFIIECIQRLRDn----qNANLQTTLATLMFNISAEYin-nQNHSV 671 Tetrahymena the...
XP_004030081 612 MKTLCNLFSQTNGKYGMFQ-------------HCRFLIEGIKYLRNs----qNQNLRNCLVCFFYNVSAEIvf-nQNYKN 673
EGT34984     712 CRCIGNAFAHPAGRSLFA----------------SYELSTLAPLVIRQllneKQILQMSAATALANWSLAL------LKQ 769
1_pfamImport 117 CRCIGNAFSHQAGRNLFA----------------STELSTLAPLVVRQvvheKPVLQISATTTLANWSLAL------LKE 174
XP_020433330 357 YRLIANCFSSKQGIDYLLKshl--------daTIECTTKGLHs--------nDKVLKRAVSTVAYNLSIFLn---PKQHD 417
Q54CK2       346 FRVINNCFFSKSGINYLFNgngndnnndnlniVIESTIDALHs--------mDKILKRAVSTLAYNLSIHLs-iDNSNHQ 416 Dictyostelium d...
XP_001616416 715 LRFYLNMFSLSTPRFYMYK-------------KLNFVAKQLAEVks-----aNFNINTLCMKIFFNYVITLn---ENNDQ 773 malaria parasit...
3EBB_A       232 AQCLSLISTILEVV---------------QDLEATFRLLVALGTLIs-dDSnAVQLAKSLGVDSQIKKYSSv-------- 287 human
XP_001350346 819 ELRKILFEQIHNFSkf------------iSDPDTLYTYSLCFHTSSeiyTKqTYEFINKYNVIDFVQNKSNelk------ 880
Q7RCI1       766 EIRKTLFQSIHDFRen------------iNEIELLYTYSLCFHTSHstyKKqTQDIIQKYDIKQFIKNKLKdlt------ 827 Plasmodium yoel...
Q23TB4       672 DAVTAYVNEIIFLIqk------------eKNAENLLKYLIACGNFAl-----------------kSANTAKplikiglsf 722 Tetrahymena the...
XP_004030081 674 ENILAFLEELIQVFqt------------eNNPDNILRILISFGNFVi-----------------kYENVSKqvlqkvdfa 724
EGT34984     770 SETVEQLGPKEDLLralitgieavdsfgfVSEEALSRLLQTIVTIMw-gDSsVIRLAKNRNMAAIAARLKD--------- 839
1_pfamImport 175 SERVEQLGPKEDLLrailsgl--ensnttLCEEAVIRLLQAIVTVMw-gDAsVIRLAKNRNVTSIAARLKD--------- 242
XP_020433330 418 DQIISLVSAIQHTLdsn---------plsEDPEIDFRLLMALGTLVy----------cSDSATDIVSSLELnyd------ 472
Q54CK2       417 EQAISLLGAIEHILsesd--------fsnEDPEISFRLLMALGTLIy----------cNDDLVEILKTLDFdfn------ 472 Dictyostelium d...
XP_001616416 774 AMRKSVFDVLHSIKhk------------iNDIELLYIFALCFHTSHemnTKeTNEIVKKFGSLDFMKNKLGsll------ 835 malaria parasit...
3EBB_A       288 --sEP--A-KVSEC 296 human
XP_001350346 881 nqqNEsnE-KTFKN 893
Q7RCI1       828 aqkNEqnE-KLFKN 840 Plasmodium yoelii yoelii
Q23TB4       723 yqpQIndA-KINEC 735 Tetrahymena thermophila SB210
XP_004030081 725 gklIQfqDqKIqqc 738
EGT34984     840 ----AtqNeTTKSM 849
1_pfamImport 243 ----IitDeTGKSI 252
XP_020433330 473 kynQSv--eKNQNL 484
Q54CK2       473 kylNSkeL-KISQL 485 Dictyostelium discoideum AX4
XP_001616416 836 phkSEqnE-KVFKN 848 malaria parasite P. vivax
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