6SX4,6SX4


Conserved Protein Domain Family
LGFP

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pfam08310: LGFP (This model is not part of the current CDD release)
LGFP repeat
This 54 amino acid repeat is found in many hypothetical proteins. Several hypothetical proteins from C.glutamicum and C.efficiens along with PS1 protein contain this repeat region. The N-terminus region of PS1 contains an esterase domain which transfers corynomycolic acid. The C-terminus region consists of 4 tandem LGFP repeats. It is hypothesised that the PS1 proteins in Corynebacterium, when associated with the cell wall, may be anchored via the LGFP tandem repeats that may be important for maintaining cell wall integrity. Deletion of CSP1 results in a 10-fold increase in the cell volume of the organism and infers the corresponding proteins involvement in the cell shape formation. The secondary structure of each repeat is predicted to comprise two beta-strands and one alpha-helix.
Statistics
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PSSM-Id: 518174
Aligned: 321 rows
Threshold Bit Score: 29.4594
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6SX4_AAA        422 GYPTSSELK-TPDGRG-RFV-TFEHGSIYWtaTTGPWEI-PG--DXLAAWGTQDYEKG 473  Corynebacterium glutamicum
Q8TQN0          604 GFPITDQRE----KDGhDYC-VFEGGIIDWndSTGTYDVkLGyeGLL-----FRAKDG 651  Methanosarcina acetivorans
Q73W24          217 GVPVGDE-----TYNGeVSTqKFSGGQVSWnr--qTKQFsTEppGLADQLKGLQVAID 267  Mycobacterium avium subsp. paratu...
4_pfamImport      2 GVPADDE-----TYDGdVVRqKFTGGELSWnr--kTKAFtTVppELADQLKDLQIPDD 52  
164_pfamImport    2 GVPADDE-----TIDGdVVSqKFTGGQISWdr--kTRAFtTTppELAAQLGAVQVPS- 51  
WP_013829394    155 GVPVDDE-----NYDGaVVTqKFSAGALSFdg--aTRTFtTVppELAAQLADLQVQld 205  Mycolicibacter
147_pfamImport    2 GVPVADQ-----SVDGnVISqRFIGGKISWnr--aNNTFtADpaNLASLLSGLQVSEQ 52  
148_pfamImport    2 GVPVADE-----SFDGeVISqKFSGGAVFWnk--kSSEFtTEptALAEQLTGLLVATD 52  
WP_025351657    121 GFPLSDEHPaGRDGQA-RYS-QFPGGVIVWsaNTGAHPV-WG--SIHGIWQGSGGDKG 173  Nocardia nova
WP_003900560    171 GAPVGDE-----TYDGeVTAqKFSGGEVSWnr--aTKEFtTVpaVLAEQLKGLQVAID 221  Mycobacterium
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