Conserved Protein Domain Family
U3_snoRNA_assoc

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pfam08297: U3_snoRNA_assoc 
U3 snoRNA associated
This family of proteins is associated with U3 snoRNA. U3 snoRNA is required for nucleolar processing of pre-18S ribosomal RNA.
Statistics
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PSSM-Id: 400546
View PSSM: pfam08297
Aligned: 66 rows
Threshold Bit Score: 41.5338
Threshold Setting Gi: 389642749
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCH58707         124 ALPEEFLNKIEEq--kQLAENDIPSQTSQhinfnd----ldesqYLSQEINTQLKKKKKKTL-SKLRATTAKRGPVTVSV 196 Tetrapisisp...
XP_014168611     177 LLPLEFLes------dDEQSDDDEA-------------------EGAKKPSATGTAARRRNIaGKLPPRDRRQGSTVYRL 231 Grosmannia ...
EPE10334         178 LLPLEFLes------dSEEEDAAIAHK-----------------QAAKAAAKAAKQPRQRVQ-LAKAPKDRMLGTTAFRV 233 Ophiostoma ...
CAP68816         388 LLPLGLLes------dDEDDESHEDNS-----------------GANNKRRKVDQVAALLR--GPKLPRDQRVGSTVYRV 442 Podospora a...
jgi:THITE_113604 287 LLPLELLes------dDEEDVARLSRPAA---------------DGTQKRRRLDSAEQLLLR-EAKLPKDKRRGSTAYRV 344 Thielavia t...
jgi:MYCTH_107458 289 LLPLDLLes------dGEDDAPRPPSPAT---------------NAQHKRRKLGGAEQTLLR-EPKLPKDKRLGSTAYRV 346 Thermothelo...
Q2H976           212 LLPLELLes------dDEDDVPQQTDSDA---------------NGQHKRRKLGAAEQALLR-EPKLPKDKRLGSAAYRV 269 Chaetomium ...
KLU87329         323 LLPAEFLes------dDSDSDGSDANPGQkrrrgaaaaaaaaaaRRPKK-IKFETAERAAARdEGRGPVDQRVGGTVYRV 395 Magnaporthi...
XP_003719007     318 LLPAEFLes------dDESDVDDDEESRKve------------vRKPKK-IKFETAERRAARqEGRGVADRRDGDTVYKV 378 Pyricularia...
O94259           222 KLDLAILEAAEVeeinSTTEIEEKVDEA----------------SLDLYTPKGHKIVFPNNEiPKKRTRSFRKGDFKVSV 285 Schizosacch...
CCH58707         197 LSSVDNFtKMAPKKEHLIMSKKEKWLKR 224 Tetrapisispora blattae CBS 6284
XP_014168611     232 LTDGGPR-ALAPKIRKYSRNVRKELVAR 258 Grosmannia clavigera kw1407
EPE10334         234 LEDTVNT-SIAPKSHSHSTSSRQEMMAR 260 Ophiostoma piceae UAMH 11346
CAP68816         443 EVKRGSE-KLAPKAKKQSINAKEALLKR 469 Podospora anserina S mat+
jgi:THITE_113604 345 VAGTGDE-RLAPKVKKQAVGLRETLLRR 371 Thielavia terrestris NRRL 8126
jgi:MYCTH_107458 347 VKSSGDT-RLAPKVKKQAVNLKETLLRR 373 Thermothelomyces thermophilus ATCC 42464
Q2H976           270 VKRAGDA-RLAPRVKKQAVNMKEALLRR 296 Chaetomium globosum CBS 148.51
KLU87329         396 LKARGDE-RLAPKKSKYAAHQKNALLAR 422 Magnaporthiopsis poae ATCC 64411
XP_003719007     379 VRPLADT-RLAPRASKRAAFDKKKLLSR 405 Pyricularia oryzae 70-15
O94259           286 LKETNDP-LLAPNYEKKLSQRKRDWINR 312 Schizosaccharomyces pombe 972h-
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