Conserved Protein Domain Family
DnaG_DnaB_bind

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pfam08278: DnaG_DnaB_bind 
DNA primase DnaG DnaB-binding
Eubacterial DnaG primases interact with several factors to from the replisome. One of these factors in DnaB, a helicase. This domain has been demonstrated to be responsible for the interaction between DnaG and DnaB.
Statistics
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PSSM-Id: 489496
Aligned: 124 rows
Threshold Bit Score: 49.937
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012486427 530 ARKALALLLAHPSLA-----TTEP--DHDAWL-TEEDE--DLQLLGRLLKVLherpHY-NLSHLIGYWRgtYgPDNTEKL 598 Cellvibrio japo...
WP_014704580 451 ERLAISILLQYPTLH-----LALT--ETESLA---NLSnkGVVVLRQLLEMLrnnpQLtNSGMLLERWR--G-HELFPHL 517 Methylophaga fr...
Q3JF10       450 TRRAVAILLQRPKMI-----QWVD--KNLSLR---GLEgaGAELLQKLVDLLqnnpHL-NTAALLERWR--D-SEMGRYL 515 Nitrosococcus o...
WP_013031153 447 ARKAVAILLQRPNLI-----QSVD--ESFSLR---GLDgrGAKLLQELIELLqsspHL-STAALLERWR--D-SEMGRYL 512 Nitrosococcus h...
WP_025281742 456 VRLALSLLLEQPSLA-----ARVQdkDWLKAV---EVP--GAKLLAKVLETLhahpHL-TTAALLERWR--D-SEAWPHL 521 Ectothiorhodosp...
Q07YT0       447 LRLAIALLVQNPSLG-----FGLA--KQPALD---RLQmtGIELLNHLLDITre-qTL-NSAQLLEMHR--E-HNQKSTL 511 Shewanella frig...
Q12KB4       447 LRLAIALLVQHPDLG-----LSLA--PQPALA---HLQlaGIELLNHLLTVTre-eKL-NSAQLLELHR--E-HPQKATL 511 Shewanella deni...
Q5ZT05       446 LRIAIALLLQNPEIYsiaiqQINP--ALLHEQ--------EHHILLKLLQQLkdkpNA-NTATLIEFWR--N-SSYFELI 511 Legionella pneu...
WP_043107197 448 MRRAIALLLQHPEAA-----RAElpe----gweTLQTP--GIEVLRELLERIrahpDT-HSAALVEATA--D-ERLRGIL 512 endosymbiont of...
WP_012971040 446 VAQVIALLLDRPDLA-----PQAL--ALNDDWrRSTQR--GIDVLIQLLDILrqspDL-SKARLLERWR--E-HPHFGYL 512 Allochromatium ...
WP_012486427 599 AAVAGHDLLQAATaltrprqdkpakadyDAEAGFSGAIQALRRQQIDKKSAQSLAKLKtadfTQL-SKAEREQLVRE 674 Cellvibrio japonicus
WP_014704580 518 EKLAKMPLDFDETd--------------KLRPELVGCIQKLQQQARYERQKYLTEKYKs--pAGL-TSSEKEELRSL 577 Methylophaga frapp...
Q3JF10       516 EQLAGWELLLTDE---------------DMVLELQAALERLQVQGAEQRIITLSNQ------PSL-TGAEQRELLAL 570 Nitrosococcus ocea...
WP_013031153 513 EQLASWELFLTDE---------------DMGLELQAALRRLQAQAAEQRMTMLSNQ------PSL-TAAERQELLAL 567 Nitrosococcus halo...
WP_025281742 522 LKLAQWQPPPSEEt--------------HLERMLDDALARLYRQYEQQRADTLLARAAq---QPL-TEAEKAELKSV 580 Ectothiorhodospira...
Q07YT0       512 IKLAQWEHQVADE---------------NVLPEFKQTLIWLNNQYIEQRYQELSLKQA------L-TKVEKMQLTKL 566 Shewanella frigidi...
Q12KB4       512 IKLAQWDHQVADD---------------NLIQEFRQSLIWLNNQYIEQRYQELSLKQT------L-TKAEKVQLQKL 566 Shewanella denitri...
Q5ZT05       512 VKLAAWDHQVPEQ---------------ELTKEFIDVLLFLQKQNREILIRQYIEKSRk---TGL-TEAERLSLQNL 569 Legionella pneumop...
WP_043107197 513 AQLAVAELAVQD----------------DAAEQLAGILRRLIEKQRAEQREALLKSASl---STM-SEEEKQRLREL 569 endosymbiont of un...
WP_012971040 513 QRLSVDPFLRDMTp-------------eGAGAELTGAIRRLSDEVREHEWRQLLNKRS----PSEwTPEERARLARP 572 Allochromatium vin...
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