5GUJ,5VAZ,4E2K,2AU3


Conserved Protein Domain Family
DNAG_N

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pfam08275: DNAG_N (This model is not part of the current CDD release)
DNA primase catalytic core, N-terminal domain
DNA primase (DNAG) is a a nucleotidyltransferase which synthesises the oligoribonucleotide primers required for DNA replication on the lagging strand of the replication fork. It can also prime the leading strand and has been implicated in cell division. Primases comprise three domains: a zinc-binding domain at the N-terminal (pfam01807), a polymerase domain (catalytic core), and a domain that interacts with the replicative helicase (pfam01807). The catalytic core consists of an alpha+beta domain at the N-terminal (this entry) and a TOPRIM domain at the C-terminal (pfam13155).
Statistics
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PSSM-Id: 518154
Aligned: 73 rows
Threshold Bit Score: 122.643
Created: 15-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5GUJ_A  17 YHHLLINTKEGQE--ALDYLLSRG-FTKELINEFQIGYALd---S---------WDFITKFLVKr-GFSE--AQMEKAGL 78  Bacillus subtilis sub...
Q89B09 126 LYHRNIFKTEY----AYQYILNRG-IDKSMIKYFNLGFSPk---N---------WYDLEKKNKKq-CYNQ--KELQEIGI 185 Buchnera aphidicola s...
Q6KHZ9 123 FYKYNIFDKQNKS--LVSFLNSRNiNDANLIDFFELGFAS--------------NENLKEKIMKk-DSTIneAILSVASL 185 Mycoplasma mobile
Q6F1J7 125 FFKLNLRSNEAKH--AVKYLHSRD-ITNEDIAFFEIGFLPk---N----------NSLVEHLISk-GYNI--SDIVEAGL 185 Mesoplasma florum
Q6MTE3 124 IFKTTLFSNLGID--ALEYLKSRN-ISIEQIKKFEIGFASd---K----------TNLVQKLLDk-NYNSldIEKANLGI 186 Mycoplasma mycoides s...
Q9PPZ6 125 WFINFLNNKNNIH--VIDYLTKRN-LNKNDLAYFKIGYAPnndeLln-----liKSNYNNLIQEndEFEL--NKLIENSF 194 Ureaplasma parvum ser...
Q8EW63 128 YYNNTLYAKENIK--CLQYLKDRH-IDDELIKFYEIGFAPk---Lpr-----dyLLNLFESTKSnhNIDN--YQLLNAGL 194 Mycoplasma penetrans
Q8D285 127 IYKKILNSKIFIE--ANDYLNNRG-LNIDSIEEFSIGFSSi---N----------INILNYLKQs-LQNF--YLLKSSGI 187 Wigglesworthia glossi...
Q7NB89 135 HSNLRLEFSTNPK--LNEFLNKRGlINEELLNNFQIGFHPk---SyslnklvedLKVFYQKHLNk-TYDD--QIILSNLR 206 Mycoplasma gallisepticum
Q98QB3 122 YFKVSLKSQVHSNskLVDFLKSRG-ISRETASEFEIGYDDg---N---------FWKIPNKEKKnfSFF-----LSNNLI 183 Mycoplasmopsis pulmon...
5GUJ_A  79 LIRRED-GsGYF--DRFRNRVMFPIHDHHGAVVAFSGRAL--GSQQpKYMNSPETPLFHKSKLLYNFYKAR 144 Bacillus subtilis subsp. subti...
Q89B09 186 LKTTIL-G-YTY--DRFKNRIIFPIRNKNGNIVGFGGRTLn-NHIP-KYINSPETQIFHKGFQLYGLYEML 250 Buchnera aphidicola str. Bp (B...
Q6KHZ9 186 INSKNG--------NFFENRMIFPIKDENDFLVGFSGREIvpNSNNvKYLNTSENAIFNKGNVLYNFNKAK 248 Mycoplasma mobile
Q6F1J7 186 GTYNEErQ-KMY--DIFTDRIMFPIRNENKELIGFSGRIIetNSEKpKYLNTKETPVFSKRKIAYNFSEAI 253 Mesoplasma florum
Q6MTE3 187 I------T-NSYtkDYFTNRIIFPIKDENDQVIGFSGRSFt-KDNDpKYLNTKENKVFKKSHLAYNIASTL 249 Mycoplasma mycoides subsp. myc...
Q9PPZ6 195 LVIDKN-G-NYH--DFFNDRIIFSIYDHLNNVVGFSGRIIt-NEKTpKYLNTKTTAVFKKDEVLYNFHNVI 260 Ureaplasma parvum serovar 3 st...
Q8EW63 195 VSLTDK-N-EFI--DFFHDRLIIPIKNEFGNIAGFSGRTIs-PNEKiKYINTKTTTVFQKENILFNLFAFD 260 Mycoplasma penetrans
Q8D285 188 FLINEK-K-KLS--NIFKNRIMIPMKDKYGNVIAFGGRSIn-NFFP-KYLNSKETLIFKKSNYLYGIYEIK 252 Wigglesworthia glossinidia end...
Q7NB89 207 YIKYIS-E-KNV--CYFSNRVIFPIKNADGQVVGFSGRAId-ENNEiKYLNTPETDYFIKGHNLYNYSSLE 272 Mycoplasma gallisepticum
Q98QB3 184 VKKET--N-QYY--DFFYKRVVFPIHNSFGDVVGFSGRAL--DENNiKYLNSPESLVFKKHKILYNWAKAK 247 Mycoplasmopsis pulmonis UAB CTIP
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