Conserved Protein Domain Family

pfam08263: LRRNT_2 
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Leucine rich repeat N-terminal domain
Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
PSSM-Id: 400522
View PSSM: pfam08263
Aligned: 101 rows
Threshold Bit Score: 33.4244
Threshold Setting Gi: 159114834
Created: 11-May-2020
Updated: 7-Aug-2020
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
Format: Row Display: Color Bits: Type Selection:
4Z63_A          9 HPHDLEALRDFIAHLE-------PKP---DGWiNsSSSTDC-C--NWTGITCN 48   thale cress
Q53Z39         33 NPQDKQALLQIKKDLGn------PTTl--SSW-L--PTTDC-CnrTWLGVLCD 73   Phaseolus vulgaris
XP_017249729   30 NNNDKQALLQIKTALKn------PTIt--DSW-V--SDDDC-C--GWDLVECD 68   Daucus carota subsp. sativus
Q38738         27 HPQDKRVLLKIKKAFNn------PYHl--ASW-I--PDTDC-C--SWYVVECD 65   snapdragon
Q8L4C1         26 HKDDKNTLLKIKKAMNn------PYTi--ISW-D--PKDDC-C--TWVSVECG 64   rape
Q8L579         27 NQDDKTTLLKIKKALNn------PYHl--ASW-D--PRTDC-C--SWYCLECG 65   rape
XP_001707641   15 VDMQYDALVQFYDSTD-------GANwmpNNW----LQSDVyC--DWIGVSCD 54   Giardia lamblia ATCC 50803
Q8S700         34 SSSQTDALLAWKASLDd------aASl--SDW-T-RA-APV-Ct--WRGVACD 72   Japanese rice
Q5Z9N5         19 PDRDIYALAKLKAALVpspsataPPPl--ADWdP-AATSPAhC--TFSGVTCD 66   Japanese rice
Q9S7I6         43 ADSDKSVLLRFKKTVSd-----pGSIl--ASW---VEESEDyC--SWFGVSCD 83   thale cress
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