Conserved Protein Domain Family
SPT2

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pfam08243: SPT2 
SPT2 chromatin protein
This family includes the Saccharomyces cerevisiae protein SPT2 which is a chromatin protein involved in transcriptional regulation.
Statistics
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PSSM-Id: 400516
View PSSM: pfam08243
Aligned: 41 rows
Threshold Bit Score: 42.672
Threshold Setting Gi: 307108442
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
KDE05558           359 SHKSKSSRRRSKTPSESETDS------------DSSQDARHRRrpsklssskpkksglddsVRSEIWRLMGRDRSk--DL 424 Microbotr...
XP_015193940       540 YKRRFDDVNEEEEEYDSEMEDfi---------eDEGEDQDD--------------------ISKHIREIFGYDKS----- 585 spotted gar
XP_019927865       571 RRIESDVEEEEESEYDEEMEGfi---------tDEGSDLEEAYsqd-------------mdYSKHIRQIFGYDKR----- 623 Pacific o...
XP_793115          534 KRGRIMVSDSEEESDYDDGDGf----------iDDTPMEQSGGs----------------dVSSYIKEIFGYDKS----- 582 purple se...
XP_006682664        40 HSSPPHKKPSSSAPNHYNLDEai---------lDSEFVAKN--------------------TSSIIQQMFRRGGSnatGS 90  Batrachoc...
WGS:AAAA:OsI_08379 329 PSSRPKPSSAVHNDHGKGKTRrlvkrkskedgcDEEEVD----------------------YKSIIRGMFNYNPA----- 381 long-grai...
Q9ZQ42             235 HQMMSKPALKRPPSRDIDHERrllkkk-kparsEDQE------------------------AFDMLRQLLPPK------- 282 thale cress
XP_009117343       266 HQMMSKPAAKRPPQRDIHDDRmplkkkkpaimsEDAK------------------------ALSMIRQMFNTN------- 314 field mus...
TNN00546           311 YKRKYED----EEEHDPEMDDfi---------dDEGEEQEE--------------------ISRHIKEIFGYDRS----- 352 Takifugu ...
XP_007228123       581 YKRKYED---EEEEYDSEMDDfi---------dDEGEEQDE--------------------ISKHIREIFGYDRT----- 623 Mexican t...
KDE05558           425 ARPFDLSDSEeegMEVDGEELEREERRAERISRLEEREEEERERRRKEEKERRRK 479 Microbotryum lychnidis-dioicae p1A...
XP_015193940       586 -KYRDESDYAlryMESSWKDQQKEEARSLKLAVIEDQEEMRREEEELKRKMAKRQ 639 spotted gar
XP_019927865       624 -KYKYESDRDianMESNFAQQMKEEARSARLGLQEDLEDIKREEEELKRKMEKKK 677 Pacific oyster
XP_793115          583 -KYGYESDFAlraMDTSYRDIQREEARSSRLGMMEDLEDIRREKEELKRKAGKKA 636 purple sea urchin
XP_006682664        91 SRQYGLDSDSgsdMEVGFSTLDREEKQSARIAKREDAEEERLQQETERRLSIKRr 145 Batrachochytrium dendrobatidis JAM81
WGS:AAAA:OsI_08379 382 --KFVGRDEDdrdMEANYASIQMEERRSARLARQEDDEELRRIMDEERREKQERK 434 long-grained rice
Q9ZQ42             283 --RFSRYDDDdinMEAGFEDIQKEERRSARIAREEDERELKLLEEEERRERLKKN 335 thale cress
XP_009117343       315 --RYAGRDDDdrnMEANFDDIMKEERRSARIAREEDEKEAQLIAQEEERERLRKI 367 field mustard
TNN00546           353 -RYKDESDYAlkfMESSWKEMQKEEARSLKMAVHEDLEEERREQEELKSKTKRKK 406 Takifugu bimaculatus
XP_007228123       624 -RYKDESDYAlkyMESSWKEQQKEEARSLRMAVLEDQEEERRELEEMKRTAAKRr 677 Mexican tetra
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