8RO0


Conserved Protein Domain Family
SYF2

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pfam08231: SYF2 (This model is not part of the current CDD release)
SYF2 splicing factor
Proteins in this family are involved in cell cycle progression and pre-mRNA splicing.
Statistics
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PSSM-Id: 518133
Aligned: 88 rows
Threshold Bit Score: 79.1743
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8RO0_M        79 DKGLDYERVRSLEMSADVTEKLEQkRKRKKNPDQGFT-SYEDMTLRQHTRLTAALDPDLDSYKKMRECVgGeQFYPTA-- 155 Caenorhabditis ...
Q8IAN0       530 NNNNNNRRDKLYNTSAFHVKKIMHkKNKK-----KDDtYELENDTNLYKKIKFNFSINRKIYDEKKKIHgS-NFYNINll 603 Plasmodium falc...
XP_001608589 433 SGDDGEDPPAIYTTSAAQAKGASKkKNKK-------DlLEVDRDSRFFKKMKFNFSINRNLYEEKKKKLgE-SFYGGDll 504
XP_002508113 378 IRGMDPKKRELTQTIEQAQELYKRwDKKKSNSAKGGEvFSKHNLYNAYEKRTAHVTVDMDEYERDKRAMgA-AFYADA-- 454
XP_005846491  56 RLGLDPSKAYRLDTAETAEAQFKKkEKKP--APQGWEqFNQATLAAAYEKRTEKIKPDRSEYEEAKSTDpE--FYRTA-- 129
XP_002985595 136 FSGIDKSKMYMLDTQEAAEEKYKKrDKNP--APFGWDvFNQKSLYNAYKKRAKTIPNTVEEYAKVRDNDpD--FYCNE-- 209
XP_006363753 143 AKGLDMSKAYMLDTQESAETKYKKwEKEP--APAGWDvFNKKTLYNAYKKRTKNVDVDVDEYNRMKETVpE--FYREA-- 216
ERN00930      56 ANGLDITKAYMLDTQEAAEVKYKKwEKEP--APFGWDvFNQKTLYNAYKKRTENIKCDMEEYEKLKECDpE--FYRNA-- 129
XP_034422950 435 QNEQAEERNYVYNTSAIKAYNSISkKKKK-----KMEaYELDNDINLYKKIKFNFSINRKIYDEKKEIYgK-NFYGNNll 508 Plasmodium berg...
XP_002257649 452 STDDKEDAPAIYTTSAAQAKGASKkINKK-------ElIEVDRDKRFFKKMKFNFSINRNLYDEKKKKMgK-SFYGQDll 523 Plasmodium know...
8RO0_M       156 ---DT--LihG--NHYPTTAAMDKLTKDVHGQVKRREQYHRRRLYDPDAPIDYINEKNKKFNKKLDKYYGKYTEDIKDDL 228 Caenorhabditis ...
Q8IAN0       604 nheNT----------KANEYDKNKVVEFCKKQEELRSKMSRKRKEKEGIFKNYINQRNKIYNKKLDRYFNKHTLEIRNKL 673 Plasmodium falc...
XP_001608589 505 atdSS----------KCTESDKNKVISFCRKQQVVRSKLSRKRQHEDGLFKNYINRRNKMYNRKLDRYFNQHTAEIRQNL 574
XP_002508113 455 ---DEyvH--GvtGADVPQDKIDRMAAELEAQKQKRANFSRRRTHRDDADVTHINERNEHFNRKIERAFGEHTREIKANL 529
XP_005846491 130 ---DSllY--GsaGR-VSEAGIDRMVAELNER--QGKSFSRRRAFREDKDVDYINDRNAHFNKKIERAFGTHTAEIKANL 201
XP_002985595 210 ---TSlqY--GktPA-VPEEFVDRMVQELEGRISKRKDFSRRRKYHEEKDIDSINERNEHFNRKIERAFGKYTVEIKNNL 283
XP_006363753 217 ---SSlqY--GkaPK-LSDEKIERMVKELKDRDEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL 290
ERN00930     130 ---TSlqY--GkaPK-TSEENIDKMVNELKEREEKRKAFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNL 203
XP_034422950 509 ihdNT----------PCSDKDKNRIIEFCKKQEELRSKLSRKRTNDNEIFKNYINRRNKIYNKKLDRYFNEHTAEIRRNL 578 Plasmodium berg...
XP_002257649 524 itdTS----------KCTERDKNNVISFCRKQEMVRSKLSRKRKEDNGVFKNYINKRNKMYNKKLDRYFNQHTAEIRQNL 593 Plasmodium know...
8RO0_M       229 E 229 Caenorhabditis elegans
Q8IAN0       674 E 674 Plasmodium falciparum 3D7
XP_001608589 575 E 575
XP_002508113 530 E 530
XP_005846491 202 E 202
XP_002985595 284 E 284
XP_006363753 291 E 291
ERN00930     204 E 204
XP_034422950 579 E 579 Plasmodium berghei ANKA
XP_002257649 594 E 594 Plasmodium knowlesi strain H
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