7AOC


Conserved Protein Domain Family
RNA_polI_A14

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pfam08203: RNA_polI_A14 (This model is not part of the current CDD release)
Yeast RNA polymerase I subunit RPA14
This is a family of yeast proteins. A14 is one of the final two subunits of Saccharomyces cerevisiae RNA polymerase I and is proposed to play a role in the recruitment of pol I to the promoter. Members of this entry has a HRDC domain, which is equivalent to that in subunit F from archaeal RNA polymerase II and RPB4 from the eukaryotic RNA polymerase II.
Statistics
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PSSM-Id: 518116
Aligned: 25 rows
Threshold Bit Score: 77.3853
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7AOC_D         2 ATECPPKMI-LRKSEKLDKDASSKFLNRYIQTIERFQDE---------------------------KSGSESVLSQLNRV 53  Schizosaccharom...
XP_003684663  13 TLNSPVVIHkRGRSQHLNKEEVLAFLDNFISEKENLLENefslsaaqegg-----detaagtgnkfDNNLTVSLAQLKRL 87 
XP_004177721  15 TLNTPITIHtTSSPQHVSHDEVLQFLEKFINEKETDIAGtasfsvsditte---sesgdttqsntiDTNLISAVSQLKRI 91 
XP_003956013  15 PLNTPITIHkSQRPQHVSKDEVLNFLETFITEKESILNNqsnfddvtgnt------sstagtiiniDTTLTSSLSQLKRL 88 
XP_003672225  15 PLNTPIVIHtTDQPKHVSKEEVLSFLNNFITEKESLIQNnalplgdaavtttstdgiasgdamisiDTTLSSSLSQLKRL 94 
XP_003674799  15 PLNTPVVIHtTAQPQHVNKDDVLKFLDKFITEKENLIQNstvalgsaegtaa--vggdaatallsiDTTLSSSLSQLKRL 92 
EJT43580       4 TLNTPVVIHaTQLPQHVSTDEVLQFLEGFINEKENIIDSttmnvvsdnaaga--dvvpavnaslsmDTNLSSSISQLKRI 81 
Q750W5        12 SLNQPVVLHvAGPPQHLDKDSALRFLSVFIEEKETAAVLgaaggavvts--------ggvgseggvDTALSSALAQLKRM 83  Eremothecium go...
XP_003646119  12 SLNHPVAIHaVGKPEHFSKSEALKFLSDFIESKES---Thsfmlnseandva--vrsggisgditvDTSLSSVLPQLKRI 86 
Q6CQJ1        12 TLNTPVVVHtVGTPTYLSKDEVLQFLASFIAEKESVPGVtlassgasttqga-vtsggisademalDTQLSSALAQLKRV 90  Kluyveromyces l...
7AOC_D        54 LMYLKGeeIPLISLNl-------pVQGPPTEELIIPP----EEMLETKEEESLKHAREEND 103 Schizosaccharomyces pombe 972h-
XP_003684663  88 QRDFKG--LPPSIVIktpvnastnAAPVEEEQEEQEEskdaSGNIVTKSASGGSKMKFTDD 146
XP_004177721  92 QRDFKG--LPPSMAN-----------DTFSSNSTSAQ----SNNEPLKSSTGGTKITFTDD 135
XP_003956013  89 QRDFKG--LPPATFE----------SPSPSTTTPVTVtvteTGDSITKSATGGTKMKFSDE 137
XP_003672225  95 QRDFKG--LPPSNLIen------tTTPSLQEESTTTTt--tKHTSVTKSATGGTKKTFGDD 145
XP_003674799  93 QRDFKG--LPPASMI----------AESVSSETNKESt---GESSVTKSVTGGTKKTFSDE 138
EJT43580      82 QRDFKG--LPPAQDF----------SAAPIQVTTAGK----NDASVGVSATGGKKTTFADE 126
Q750W5        84 ERDLKG--LPPTILSg--------ADEEEREEEPEAV----VGETVSRSATGGTKRRFADE 130 Eremothecium gossypii
XP_003646119  87 ERDLKG--LPPAILE---------GTEQGEDEYPKRL--------VTKSLTGGTKRKFEDE 128
Q6CQJ1        91 ERDFKG--LPPQVME----------MEPSSTSSTGNT----EEDTVAKSATGGKKIKFADV 135 Kluyveromyces lactis
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