2YRV


Conserved Protein Domain Family
RBB1NT

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pfam08169: RBB1NT 
RBB1NT (NUC162) domain
This domain is found N terminal to the ARID/BRIGHT domain in DNA-binding proteins of the Retinoblastoma-binding protein 1 family.
Statistics
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PSSM-Id: 400474
View PSSM: pfam08169
Aligned: 32 rows
Threshold Bit Score: 117.705
Threshold Setting Gi: 699240263
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2YRV_A          8 LNDELLGKVVSVVSATE----RTEWYPALVISPSCNDDITVK--KDQCLVRSFIDSKFYSIARKDIKEV-DILNLPESEL 80  
XP_011674820  178 EPEDAVGKIVIVEMNEKr---KNSFFPALVVDPSCTKDVQTNr-KDYIVARSFKDNKFYTVSRSSRKPFlSKDHTYKGDV 253  purple sea ur...
7_pfamImport    1 EVEEHIGKVVLIESTDSkkkdKEKWFPGLVVSPMAQQTARIRv-KDEYLVRSFKDGRYYTVPKKETNEF-SKEAASKQDS 78  
EFN72397      191 ETEPEIGKVVCVELGDKk--kKDNWFPGLVVAPTAQDTVRIRv-RDDYLVRSFKDARYYTVPKKEATEF-TKELVNKVEN 266  Florida carpe...
2_pfamImport    1 EREEHIGRVVCVEGSEKkk-qKDNWFPGLVVAPTAQDNVPIHv-KEEYLVRSFKDGRYYTVPKKEANEF-TREVGARAEH 77  
XP_008196325  166 GYSNDIGRVVSVEATDKkr-gKDNWFPGLVVIPSAQPTVRINv-KDEYLVRSFKDGRYYTVPKKEVSEF-NREMGEKVES 242  red flour beetle
EKC38538      183 KNQELVGKVFLAEIGEK----KKQVLPVLVVLPDAHATELRT--KDHLLVKSFKDGKFHTYQRKELKDF-SKEAIAKIED 255  Pacific oyster
EEC15434      163 LPDWSVGRVGCLDVGDKr--kRDSWVPVLVVSPSATGSAGGQlgRDELLVRSFRDSKFFQVTKRELREF-SRDSSARVES 239  black-legged ...
XP_002425904  171 EKEADVGKVVCVELGDKkk-vKDNWFPGLVVSPNAQDTVQIRv-KDEYLIRSFSDGRYYTVPKKEASEF-TREIGIKVDN 247  human body louse
XP_029344729  165 MEEKDIGKVVCVEANDKkk-vRDNWFPGLIVAPTSQSSVKTNi-AEDYLVRSFKDGKYYTVPKKEITEF-TKEIGARVEN 241  pea aphid
2YRV_A         81 -STKPGLQK----ASIFLKTRVVPD 100 
XP_011674820  254 aSLKAANEK----AVTFIDTGQLPP 274  purple sea urchin
7_pfamImport   79 ----QAVQA----AVKFLEDKVLPP 95  
EFN72397      267 sTLKVAVEK----ALLFLEKNELPP 287  Florida carpenter ant
2_pfamImport   78 pTLKAAVDK----ALLYLDSDELPP 98  
XP_008196325  243 sVLAEAVGK----ALKYLDHNELPV 263  red flour beetle
EKC38538      256 kNAKQALER----AVTFSEKQELPS 276  Pacific oyster
EEC15434      240 nALRSAVDR----ALAFLDQRVLPP 260  black-legged tick
XP_002425904  248 nTLKTAVEK----ALHFIDKDELPP 268  human body louse
XP_029344729  242 ----PTLKTavekALFFLDKDELPP 262  pea aphid
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