5JPQ


Conserved Protein Domain Family
BP28CT

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pfam08146: BP28CT 
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BP28CT (NUC211) domain
This C terminal domain is found in BAP28-like nucleolar proteins.
Statistics
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PSSM-Id: 400454
View PSSM: pfam08146
Aligned: 144 rows
Threshold Bit Score: 90.3246
Threshold Setting Gi: 89302243
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5JPQ_G       1515 VVKNVSSLSSIFLSAMDLRRTVAAGDiasqisaMELDEIETKTHEDALKMVYKLNDAAFRPIFSKFVEWA-----TTGLP 1589 Chaetomium th...
EFJ24134     1698 VTAYHTKVFDLCKEALDLRRKRPESF-------VSRHTVEESVISAVTSLVMKLSETTFRPLFVTIQQWAa----SPVAD 1766 Selaginella m...
XP_006653644 1853 VGTYHTKVYEHCLVALDLRRQHLDSL-------KNIATVEKSIIHAITTLTMKLTEATFRPLFLRTLEWAesevdQS--T 1923 malo sina
XP_018676367 1855 IGTYHVKIFEHCLIALDLRRQLPESI-------KNINMVEQSVIDAMTVLTMKLTETMFRPLFFHSLEWAesefeGSDCV 1927 wild Malaysia...
ERN00195     1862 VVTYHADIFKISLVALDLRRKHPVAI-------KNINVVERSVINAIVTLTMKLTETMFKPLFIRSLEWAeseveENGLT 1934 Amborella tri...
XP_006595739 1834 IVAFHGKIFDLCLVALDLRRQSPPSV-------QNIDVVEKGVLNAMTVLTLKLTESMFKPLLIKSIEWAesevdETASS 1906 soybean
XP_009147153 1902 VVCNHAKIFDQCLAALDIRRQNPATI-------QNVDDAERSVINATVTLTKKLTESEFKPLFIRSIDWAeseivDGSGN 1974 field mustard
XP_010662259 1848 VSNYHVKVFDLCLLALDLRRQHPVSI-------KNIDTIEKNVINAMIVLTMKLTETMFKPLFIKSIEWAesnmeDSDTG 1920 wine grape
EEF51608     1814 VGGHHEKIFDLCLRALDLRRQHPVSI-------QNIDIVEKSVIDAMISLTMKLTESMFKPLFISSVDWAeshveEIDNE 1886 castor bean
XP_010318175 1835 VGAYHVRIFDVCLQGLDLRRQHPAAV-------KNVDAVEKNVINTVVALTMKLTEKMFKPLFMRSIEWSesiveENENV 1907 tomato
5JPQ_G       1590 KSDVTgrtYRLYVVFGFLDAFFGSLKSIVTGYASYIVDASVKALkavDFA-VPEERN----------------------- 1645 Chaetomium th...
EFJ24134     1767 GSQSI---ERSIVFYKLVNQLADKLRSVFVPYFRYLVDGCLAVL--------AKSGEtrkskkrktvsv--------sad 1827 Selaginella m...
XP_006653644 1924 SKRSL---DRAIVFYKLVNSLAEKHRSLFVPYFKYLLEGSVQYL---SE--DDGLISskqkkkakleyaqv-----gqkd 1990 malo sina
XP_018676367 1928 QSRSL---DRSISFYNMVSKLTEHHRSLFIPYFKHLLEGCVRYL---TEAhDGNEALakrrkkakvadsfs-----hsky 1996 wild Malaysia...
ERN00195     1935 TKRNL---DRNIAFYSLIDKLAEKHRSLFVPYFKYLISGCMHAL---TD--DEFLDSgvsmqkkkkakfmetn-sntrgl 2005 Amborella tri...
XP_006595739 1907 G--SI---DRAISFYGMVNKLTESHRSLFVPYFKHLLGSCVHHL---SD--GGDVKVsrvnrkkkarilddg---nikei 1973 soybean
XP_009147153 1975 ESKSV---DRSISFYGLVNRLCKAHTSIFVPYFKFMLDGIVSHL-------TSAAGAsvstrkkkkakiq-------etd 2037 field mustard
XP_010662259 1921 ST------NRAISFYGLVNKLSENHRSLFVPYFKYLLEGCIQHL---TD--SEDVKNvnlmrkkkkaklqeasfdrkegs 1989 wine grape
EEF51608     1887 GGASV---DRSIALYGLVNKLAENHRSLFVPYFKYLLEGCVQHL---LD--AVDAKNagltqkkkkakiqeagmdvnekt 1958 castor bean
XP_010318175 1908 GTKSI---DRSIAFYGLVNSLADSQRSLFVPNFKHLLDGCVRHL---MD--AEGAEStlkhkkkkvklqesns-kkkdtn 1978 tomato
5JPQ_G       1646 ---------LWKRVLCTLAKCFEHDQDG 1664 Chaetomium thermophilum
EFJ24134     1828 sgsalakwhLKHLVVSSLHKCFLYDSVG 1855 Selaginella moellendorffii
XP_006653644 1991 nlsgpklwnLRTLVLKSLYKCFMYDNDQ 2018 malo sina
XP_018676367 1997 ellflkqwhLRAVILKSLYKCFLYDNDl 2024 wild Malaysian banana
ERN00195     2006 kpllpsqwhLRALILSSLHKCFLHDKEN 2033 Amborella trichopoda
XP_006595739 1974 gsvsikgwhLRALVLSSLHKCFLYDTGt 2001 soybean
XP_009147153 2038 dtlppkswhLRALGLSCLNNCFLHDIgs 2065 field mustard
XP_010662259 1990 salllekwhLRALVISSLHKCFLYDTGs 2017 wine grape
EEF51608     1959 sllslktwhLRASVISALHKCFLYDTGs 1986 castor bean
XP_010318175 1979 cglsiglwhLRALILSSLHKSFLYDTGt 2006 tomato
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