Conserved Protein Domain Family
SRR1

?
pfam07985: SRR1 (This model is not part of the current CDD release)
SRR1 domain
SRR1 proteins are signalling proteins involved in regulating the circadian clock in Arabidopsis. This presumed domain has a Rossmann-like fold and structural models suggest it may have a methyltransferase function.
Statistics
?
PSSM-Id: 518010
Aligned: 125 rows
Threshold Bit Score: 66.6003
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_012186846 109 FASELARVvkrvwpveqstlqckadaeaqtsqdssprpraeepqdalhppsssqaSTAPPLPRQIVCLGLGSp-----TT 183
XP_002647129  64 IERILEEKkag------------------------------------------nsNVRVQKIDKIVLIGNGH------FD 95 
NP_001255226  63 LQLLISPH---------------------------------------------------QKIQTIYVIGNGH------FD 85 
XP_001320816  40 VKDLFQQK----------------------------------------------------SIKTIYCIGIGDp-----CK 62 
XP_001318522  44 LIKIFTEK----------------------------------------------------KINSIIVLGLGDm-----CT 66 
Q7RKB1        89 FKKKFKEI-----------------------------------------------KKENIIIQSAICLGLGSltdinlNN 121 Plasmodium yoel...
Q6CES0        44 LQQTLEKH-------------------------------------------------STKEFADIQCLALGKp-----AE 69  Yarrowia lipoly...
XP_013936504   3 IVKTLESWk----------------------------------------------PSSTGSWSKVRCLALGSp-----IE 31 
Q757C9        37 LTTHLEPH--------------------------------------------------KERLTRIRCLALGKf-----HE 61  Eremothecium go...
XP_001612918  75 FLQQLTQVv----------------------------------------------DEAKAKIKCAICLGLGSledpnwSN 108 malaria parasit...
XP_012186846 184 SRSA--QIQLALLVVIRSWLLRHSsrssssalgsktiegsMECLAFDPVFSAADTALLK----------------R-YDV 244
XP_002647129  96 WSDQpgAHQFALFLEISRIFHVD------------------SVVFQDPCISEPENRYLEl-------------------- 137
NP_001255226  86 GSTEpgAHQLALFLEISEQFQC-------------------PIIFQEPVCSATELKWLEs-------------------- 126
XP_001320816  63 NLAA--RYQISFIIKIAKELSIE------------------KLKYYDPCTCSDCLPILS----------------Q-MGF 105
XP_001318522  67 EISA--RKQISFILSIIEKFDIK------------------NIRFYDPISCKNCNGFLE----------------S-KGF 109
Q7RKB1       122 KNAC--MYQLAFILLVSKNYNIK------------------HIYIYDPKISNTDLNVYK----------------I-LNV 164 Plasmodium yoel...
Q6CES0        70 DEGV--RYQLVLLLLLAEELKip----------------lDKVVCTEPMFTARDEEMLKllgmktvtgmwdpdfrT-KDV 130 Yarrowia lipoly...
XP_013936504  32 EEQA--NYQLAFLCEISRHLNID------------------TVSVYDPAFTKDDKRFLSsecg--------fqieTsFEP 83 
Q757C9        62 EAPA--RWQLALLLELVDYLGHEV-----------------QCSLYDPAFTAEELSYVEql------------geR-WSV 109 Eremothecium go...
XP_001612918 109 RRAC--LYQLSFVLLLGRIHNVE------------------QLFIYDPKIGEVDEDVCG----------------R-FGV 151 malaria parasit...
XP_012186846 245 RTLssslhteveQKEHNQGnraesi--------------------------------------epfytAITEPT------ 280
XP_002647129 138 ------------KNVENRQ-------------------------------------------------KIDTKIdigdg- 155
NP_001255226 127 ------------KNVEIRR-------------------------------------------------EMDAKIdiceek 145
XP_001320816 106 EVLs--------ENSEGVY-------------------------------------------------NSEENT------ 122
XP_001318522 110 HIDs--------ENLYGQY-------------------------------------------------EASPNS------ 126
Q7RKB1       165 QVLssytsiskqLAENEKEitv-------------------------------------------cnlKENENV------ 195 Plasmodium yoel...
Q6CES0       131 EEEtk------sVKSDTQK-------------------------------------------------ADMEDTtdiaae 155 Yarrowia lipoly...
XP_013936504  84 HNM--------------------------------------------------------------------DCV------ 89 
Q757C9       110 DEQsp------wST------------------------------------------------------ESSDKL------ 123 Eremothecium go...
XP_001612918 152 EVLs--------PREEAPPegpqkrgeaqrggpqregpqksgeaqiegppsgaapkegeqidrtipkpRANERT------ 217 malaria parasit...
XP_012186846 281 ---------------------LLYMPHCDRGLYEEVLsl-nYsssatttq-tpkpngpsP---IVLLCNTLSNYQNttsd 334
XP_002647129 156 ----------------adqlsIFVLIHGEHEIFSDFLehnwLki--------------aEnqnCVVIGNNYGGIDWqlsi 205
NP_001255226 146 s--------------issmlsIFAFIHGEHEIFNEFLe--fNa---------------gKidnLIVIGNDYGGANWelsk 194
XP_001320816 123 ---------------------AFYLPHCPAFLYHNLLas-nLsle-----------kfkN---LIIIGNSFEEHSKkaki 166
XP_001318522 127 ---------------------AFFIFHGPHFLYHNLItt-nLtpd-----------klaN---IVIIGNSIENSrnlkns 170
Q7RKB1       196 ---------------------LLFMPHCDISLYGEVLyn-iFiyeklsypnmnfllipeK---TIYIGNSFDYYKDhiyq 250 Plasmodium yoel...
Q6CES0       156 sgdiedltksisevklqptesFIYAPHAPVNVNELLFi--------------------nA---DFIVANYLGSYDTrfgd 212 Yarrowia lipoly...
XP_013936504  90 ---------------------LFFVPHAPIDLLESLFs--iK-----------------P---NYILTNDVSIYTNkftd 126
Q757C9       124 ---------------------LFFLPHAPLSLTESVVea-eQ-----------------P---RLWLANQLVQHTDrytk 161 Eremothecium go...
XP_001612918 218 ---------------------LLFMPHCDVSLYSQVMhd-iYvneklsydkvhfllplaK---TIFLGNSFEYYREhvym 272 malaria parasit...
XP_012186846 335 qdlqn---------------------------------haptlhrltPQFNVEElpnweggrkglplvrqlqvg------ 375
XP_002647129 206 frkn-----------------------------------hpkidqfwEKSKIT--------------------------- 223
NP_001255226 195 nrek-----------------------------------mpkitefcEKSIIT--------------------------- 212
XP_001320816 167 -------------------------------------------gevtYKSLIEE-------------------------- 177
XP_001318522 171 ------------------------------------------sgfimGEAFDAGi------------------------- 183
Q7RKB1       251 hkpfgipsfaiellqkneqsenikwdithlnkvkknfkyshfifyilNFLNEIKfp------------------------ 306 Plasmodium yoel...
Q6CES0       213 defkq---------------------------------kypalstilQSEKDLKcewe---------------------- 237 Yarrowia lipoly...
XP_013936504 127 keyfd---------------------------------kyplcatvcNSIGTKVddgftvvkrrnkhti----------- 162
Q757C9       162 aqlfe---------------------------------kyplisklvSYLDSGSkvgtastdgfsafvpkrsrrqrrnka 208 Eremothecium go...
XP_001612918 273 yrpfgipayairmlksggtlp-egatqrslnrleelykmdhflfyihKYAREGKfp------------------------ 327 malaria parasit...
XP_012186846 376 -------qkesktekedavgeegaenVVGEFARlWDRNALRDLAFHW 415
XP_002647129 224 ---------------------------PFPEIYkPHNSAFSSTVIMC 243
NP_001255226 213 ---------------------------AFPAIYePNSNAFSSTVIMS 232
XP_001320816 178 --------------------------TFNKKFIiEQQLNFND-NLFF 197
XP_001318522 184 --------------------------LNETMLNfNHDPSFDNTALIT 204
Q7RKB1       307 -------------------------iCSEQVHA------FNDLSIIT 322 Plasmodium yoelii yoelii
Q6CES0       238 ----------------------mieiPDKLSKGeAWAVAYNGFGIHR 262 Yarrowia lipolytica
XP_013936504 163 -----------srneiplpkiavlchKINPYFTrPWAHSFSDLCLYA 198
Q757C9       209 vyrepdidygsvksyftgctvltdfsGGELLRDkPWLNAFSDLALHR 255 Eremothecium gossypii
XP_001612918 328 -------------------------fCPEHVSA------FNDMAIIT 343 malaria parasite P. vivax
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap