6W6L


Conserved Protein Domain Family
CCDC47

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pfam07946: CCDC47 (This model is not part of the current CDD release)
PAT complex subunit CCDC47
This family represents CCDC47 proteins which are a component of the PAT complex, an endoplasmic reticulum (ER)-resident membrane multiprotein complex that facilitates multi-pass membrane proteins insertion into membranes. The PAT complex, formed by CCDC47 and Asterix proteins, acts as an intramembrane chaperone by directly interacting with nascent transmembrane domains (TMDs), releasing its substrates upon correct folding, and is needed for optimal biogenesis of multi-pass membrane proteins. CCDC47 is required to maintain the stability of Asterix. CCDC47 is associated with various membrane-associated processes and is component of a ribosome-associated ER translocon complex involved in multi-pass membrane protein transport into the ER membrane and biogenesis. It is also involved in the regulation of calcium ion homeostasis in the ER, being also required for proper protein degradation via the ERAD (ER-associated degradation) pathway.
Statistics
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PSSM-Id: 517983
Aligned: 148 rows
Threshold Bit Score: 151.952
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6W6L_7       135 SYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNTHRELLESNFTLVGDD------GTnkeatstgkLNQENEHIYNLW 208 human
XP_003137608 119 SYQVEALVLSILAVYMLNYIFGRIKNRNIANKWFMDVTPFLEEQFTLVG-Ddg--tsEDlre----ghIHKETDSVYTIW 191
KAF8357635   123 SYQVEAVVIFLLLVYLTNYLAGRAANQSIAFSWVDNHRDRLEEQFAVVG-Ddg--lsETpsn----gqLNRETDNLFSMW 195
Q23382       103 SYQVEGIVVLIILIYMTNYLIGKTTNASIAQTIFDMCRPTLEEQFAVVG-Ddgt-tdLDkmi----psLKHDTDSTFSAW 176 Caenorhabditis ...
XP_001635664 150 GFYVEILTLAGLAAYALNFFAGRTKNSKLATAWLKSHKELLESNFHIVG-Ddg--qaEEpqq----giMVKESESLYSLW 222
OWR49287       7 AYWLEGVLCCLLAAYALVYAIGRAKNTTIATNFLKLHRPLLEDNFTLVG-Esg--sdMVped----rgWRREAEHCFTMW 79 
2_pfamImport   1 AYWLEGILCCLLASYALAYAIGRAKNTSIAVNFLKLHKPLLEENFTLVG-EtgaevvSGade----rgWRREAEHCFTMW 75 
NP_001162147 107 NYIMETLLIVGIVAYFANFFYGRSKNAQLADIWFKTHKSLLEDNFSLVG-Ddg---kIEien----sgLIKETESTYTLW 178
XP_067744981  63 YFAIEASSWGFGILFLVLYFVGKAQNRKIADKWLEEAEPLLRTQFSYTGSS-------Veng----mgLLEESRSNFKYF 131
XP_002128684 128 KYYVEILMALGIFVYLINFFIGKAKNNTLASSWLSHHLDFLHKSFALVG-DdpqnkkIEst-----neLQKESEHVYTLW 201 vase tunicate
6W6L_7       209 CSGRVCCEGMLIQLRFLKRQDLLNVLARMMRPVSDQVQIKVTMN-DEDMDTYVFAVGTRKALVRLQKEMQDL-SeFCSD- 285 human
XP_003137608 192 CSGRVGCQGILITLELLKRQDLIHVVMNFIRpKQDKVIIRIDVD-NNEMDSFVFAIGQRKSVTKAAKEKMDLsL-FTVer 269
KAF8357635   196 CSGRVGVSGCMVHIRTIKRQDLVSRIWGIFnKNYDRVTLTFDVD-EGEMDSFVVAAGQRKSVTRLHKELLDLsQ-YTTek 273
Q23382       177 CTGRVNVNSLFLQMKMVKRQDVVSRIMEMFTpSGDKMTIKASLEtTNDTDPLIFAVGEKKIASKYFKEMLDLnS-FASEr 255 Caenorhabditis ...
XP_001635664 223 CTGRTGCNGMLVELKLQKRHDLVNVMSYLVKpVKDSITVTVHMT-DEEMDNFVFAIVPKKTVSKMQKELQDLsF-FCPdk 300
OWR49287      80 CSGRQCCEGMLLTLKLIKRQDLVNVLLGVVRpNPDTLLIRVELG-KDDNDPFVLCVAQKKVATRLSKEMQDLsM-FCPer 157
2_pfamImport  76 CSGRSCCEGMLLTLKLIKRQDLVHVLLGVVRpNPDTLQIRIELG-KDDMDPFVFCIAQKKIAAKLAREMHDLsV-YCGer 153
NP_001162147 179 CSGRTCCEGMLVELKFIKRQDLASMLNQFLRpVKDEVQIKVDMN-KEDMDTFVFCVASKKTAARCSKEMADLsV-FCPer 256
XP_067744981 132 CTGRRFLTRFVADLELKSRHDLISRIYRLVvPTSDYLTIDVGLH-GEEVDPFILGISKKLGFTALSKVFPELiE-TAKQ- 208
XP_002128684 202 CSGRQCCEGMLVELKLLKRQDLISVIAHQMKpINDQVTISVKMT---TLPSLVFCVGIKKSITNLHKTMQDLcL-YCADk 277 vase tunicate
6W6L_7       286 ---KpksgAKYGLPDS-LAILSEM-GEVTDGMMDTKMVHFLTHYADKIESVHFSDQFS------------GPkimqeegq 348 human
XP_003137608 270 -kgV----DRLGLP-SsIVVYAEM-FEAVNAIIDPVILSVFRKYESAIDYFHFSDQYSgykpsd-gesftRL-------- 333
KAF8357635   274 -kmA----PGPSLP-PsFSLFSES-SEVASCLLDNAVLTLAKKYEDNIEYIHISDQYSgpkppd-getltRL-------- 337
Q23382       256 kqaA----QQFNLP-AsWQVYADQ-NEVVFSILDPGVVSLLKKHEDAIEFIHISDQFTgpkpae-gesytRL-------- 320 Caenorhabditis ...
XP_001635664 301 -ksG----AKYDLP-AsLVILSES-NEVANTLLTQQVTKAISNHEDMFESLLFSDQYVgpkqededqaaaKP-------- 365
OWR49287     158 -rpG----DKHGLP-GsLSVMSEC-AEATAALLDARVVAALTQFAAHVQYIHVSDRYCgpkqme-etsvtKP-------- 221
2_pfamImport 154 -raG----ERLGVP-GaLSVVAEC-AEPGAALLDARVCAALQLHHRHLLYLHLSDKYAgpkhle-etastKP-------- 217
NP_001162147 257 -kpG----ANYGLT-DsFSVHSEL-AEVSSSILDAKTVNYINKYSDVIDCLHFSDRYSglkltdetaiptKL-------- 321
XP_067744981 209 ---I----SVKEVPES-MWVATDC-TETPKLALTQSLQASLNDLEDFLEYIVITDMNKql--------iiGM-------- 263
XP_002128684 278 akmG----EKYNLP-LsMLMLSELyGDVPAFILDSTVVRVLKDHQNLFDSLHISDQYSgakpldqnddapAI-------- 344 vase tunicate
6W6L_7       349 PLKlpdtkrTLLFTFNVPgS--G-NtypkdmEALLPLMNMVIYSID-K-AkkFRLNREGKQKADKNRARVEENFLKLTHV 423 human
XP_003137608 334 PETs----rVLFFAFKMsn----------nmAEIDALLRMVFHCFE-KiRr-YRLSREGKLKADKKRQSVQEAFLKTTHQ 397
KAF8357635   338 PETr----rVAVFSFILh---nQsAey--drEAEDEMIQMAFYCVD-KmRr-FRLSREAKQKGDKRRQTAQELFQKSNHQ 406
Q23382       321 PEAq----rYMFVSLNL-----QyLgq--deESVMEILNLVFYLID-KaRk-MKLSKDAKVKAERRRKEFEDAFLKQTHQ 387 Caenorhabditis ...
XP_001635664 366 LKPk----kVLIFNFTVAsKgnT-Kvq--dmARLESMMKLVLHCID-RvRk-FRLGKEARAKADKNRRELEENLLKQTHL 436
OWR49287     222 PETe----rVLLASLSLSgEggG--------DEVRPLMLMIFYMLD-RiKr-LRLSKEALSKCEKRRQKAAEAWVRGAHA 287
2_pfamImport 218 PETe----rVMLVSLALGpDggG--------DELRPLLQLVFYILD-KlKr-FKLSKEALAKCEKRRQKVAEAWLRGAHA 283
NP_001162147 322 PAVk----kVLIFTFTIPtDkyAdPqe--aiSTIYPLMSFIFQCME-RiKr-LRISKEAKIKAEKNRLRVEEAFLKTTHA 393
XP_067744981 264 PKTqk---hVLRVRFKLKaGskH--------LDVSKALQLVFSLIDaAgAt-IKLSPNAKHSAIKRRLKIKQAADALASA 331
XP_002128684 345 PETvkq-itLVIN---LPe-----Kps--eiGEMVPLLKMLIYLSD-KlKk-LRLSRDSQIKADKHRADVADRYLKQTHA 411 vase tunicate
6W6L_7       424 QRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKK 467 human
XP_003137608 398 ARQEAAQARREEKTRERKQRLLEEEDPEKQRRLEKLEQKRDMKl 441
KAF8357635   407 ARQEAAQARREEKTRERKQKLLEEEDPDKQRRLELLEYKKELKa 450
Q23382       388 FRQEAAQARREEKTRERKQKLMDESDPERQKRLEAKELKREAKa 431 Caenorhabditis elegans
XP_001635664 437 QRQEAAQLRREEKRRADKERMMAEDDPDRQRRLEERVNKAEAKR 480
OWR49287     288 ARQESAALRREEKRKQEKERILAEDDPEKQRRWELKEQKRQQKR 331
2_pfamImport 284 ARQEQAALRREEKRKQEKERILAEDDPEKQRRWELKEQKRQQKR 327
NP_001162147 394 ARAEAAAARKEEKKKLEKERILKE-DPEKQRKWEEKEMKRQQRK 436
XP_067744981 332 KEDEIAR--RQAELNEKKHKNYESLSYEEQQKIDAKNEKRATHK 373
XP_002128684 412 QRQEAAQQKKEEKARALKERMMNEEDPEKQRRLDEMIQRKEQNK 455 vase tunicate
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