Conserved Protein Domain Family
K_channel_TID

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pfam07941: K_channel_TID (This model is not part of the current CDD release)
Potassium channel Kv1.4 tandem inactivation domain
This family features the tandem inactivation domain found at the N-terminus of the Kv1.4 potassium channel. It is composed of two subdomains. Inactivation domain 1 (ID1, residues 1-38) consists of a flexible N-terminus anchored at a 5-turn helix, and is thought to work by occluding the ion pathway, as is the case with a classical ball domain. Inactivation domain 2 (ID2, residues 40-50) is a 2.5 turn helix with a high proportion of hydrophobic residues that probably serves to attach ID1 to the cytoplasmic face of the channel. In this way, it can promote rapid access of ID1 to the receptor site in the open channel. ID1 and ID2 function together to being about fast inactivation of the Kv1.4 channel, which is important for the channel's role in short-term plasticity.
Statistics
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PSSM-Id: 517979
Aligned: 4 rows
Threshold Bit Score: 74.7552
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_022522782   1 MEFAMVGADsGGCNPHMPYGY-AQARARERERE---RERHSRAAAAAAAAAAAaAAADsgatGEGGGTGGTCIHGQQHQV 76 
1_pfamImport   1 MEFAMVGAD-GGCNSHLPYGY-AQARARERERErerQVAHTRAAAAAAAAEGG-TCTE----GGGGGGGGSCGGVGGSTS 73 
Q61423         1 MEVAMVSAEsSGCNSHMPYGYaAQARARERER-----LAHSRAAAAAAVAAAT-AAVE----GTGGSGGGPHHHHQTRGA 70  house mouse
XP_056707422   1 MEVAMVSAEsSGCNNHLPYGYaAQARARERER-----LAQSRaaaaaavaaataavemggsggggpyhhyhqeqgrgass 75  tarantolino
XP_022522782  77 R 77 
1_pfamImport  74 N 74 
Q61423        71 Y 71  house mouse
XP_056707422  76 s 76  tarantolino
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