4EJY,3I0W


Conserved Protein Domain Family
OGG_N

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pfam07934: OGG_N (This model is not part of the current CDD release)
8-oxoguanine DNA glycosylase, N-terminal domain
The presence of 8-oxoguanine residues in DNA can give rise to G-C to T-A transversion mutations. This enzyme is found in archaeal, bacterial and eukaryotic species, and is specifically responsible for the process which leads to the removal of 8-oxoguanine residues. It has DNA glycosylase activity (EC:3.2.2.23) and DNA lyase activity (EC:4.2.99.18) . The region featured in this family is the N-terminal domain, which is organised into a single copy of a TBP-like fold. The domain contributes residues to the 8-oxoguanine binding pocket.
Statistics
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PSSM-Id: 517976
Aligned: 54 rows
Threshold Bit Score: 68.4239
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4EJY_A        26 VIVRGIAD--FNLKETF--ESGQCFR--WNEEEDGs--YTGVAYD-----RVVNVKl-EG--DTLIIDNTN--------- 80  Caldanaerobacte...
WP_012200044   1 MYQITVEN--FDIRKIC--YSGQCFR--MKEISETs--YEVVAYG-----HYLRISq-QD--NELTFSCTE--------- 55  Lachnoclostridi...
Q97FM4        13 VIVRNVEN--FELKDIF--DCGQCFR--WHRQENGn--YIGIAFE-----KVVEVQk-IG--EDVVIYNIN--------- 67  Clostridium ace...
WP_011989030  13 VILKDVRN--FELPHIF--DCGQCFR--WNREKNGn--YIGTAFG-----KVIEVEk-KE--DDVFIYNTC--------- 67  Clostridium klu...
1_pfamImport   1 IVIKDVIN--FELPHIF--DCGQCFR--WNRQENGn--YIGVAFN-----KVIEVEk-KE--NDVIIYNTN--------- 55 
Q8KDP9        14 SLLNTKSR--LNFKDTV--QSGQSFR--WNLNETLksyYSSVIYN-----SIIFICe-IN--SEMIEVLCTdqe----ls 75  Chlorobaculum t...
WP_012508069   5 TIIKTRAP--FDIRQTL--FSGQSFL--WNINKDEpdfYAAIIKS-----KPLIIKq-IA--DNELEVYAEdkv----in 66  Pelodictyon pha...
Q2NI85        11 IVDFNEYVgdFDLILTM--NSGQTSQppWKMDDNN---YYEII-LidnidVLVKISq-EKlnDPLIVKYFSkee----fn 79  Methanosphaera ...
Q81A49        10 SIAVPKE---FCFQENLryLSRSNNEcmFHIEDNK---IYKVI-PvqdvnPLVEISvnTD--GNIQIRCLEepytseksi 80  Bacillus cereus...
Q5WD74        11 IIALPEE---FDMNANLgyLKREKNEcmYETENDH---ITRMI-AigeirSLIQISviDN--KQMVVQFLNdsrpseewq 81  Bacillus clausi...
4EJY_A        81 LTDFYDIWFDYFDLGRDYGQIK-ESLSK-DPVLKEAIkfgQGIRI-LRQDTWETL 132 Caldanaerobacter subterraneus subsp. ten...
WP_012200044  56 -GEFHSIWNEYLGLNVDYDTIT-GLVNEdDRYMKSAMsfgWGIRI-LKQELWETI 107 Lachnoclostridium phytofermentans
Q97FM4        68 EEEFKNVWSEYFDLYRDYGEIK-KELSR-DPLLKKSVdfgEGIRI-LRQDPFEIL 119 Clostridium acetobutylicum
WP_011989030  68 EKDFKEIWCEYFDLYRDYGEIK-HILGK-DPILKKAVgfgGGIRL-LKQEPFELI 119 Clostridium kluyveri
1_pfamImport  56 EKEFKEIWCEYFDLYRDYSTIK-DILKK-DPLLKKSVefgHGIRL-LKQDPFELV 107
Q8KDP9        76 GKPINEFLKHLFSLDFQEETVFsSRFQQeFPEVWNLVqsyRSVRV-MRQDPFEIM 129 Chlorobaculum tepidum
WP_012508069  67 GVPLVDFISHYFTFDIDTEQIFpDNFSHlYPTLWQLLtdyFPVRI-MRQDPFETM 120 Pelodictyon phaeoclathratiforme
Q2NI85        80 VEKLRTKLFYIFDLDYNINEVY--DFLEeNSQLSDVYefnRGLRLfKSQFPFECI 132 Methanosphaera stadtmanae DSM 3091
Q81A49        81 REAVVNYVKEWFDLTTDLAPFY--TLAKhDLLLQGPIeqyYGLRTlGIPDLFEAL 133 Bacillus cereus ATCC 14579
Q5WD74        82 REKIVKYIHEWFDLNTDLTPFY--EMAKaDPLLKKTVetfYGLRVvGIPDLFEAL 134 Bacillus clausii KSM-K16
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