Conserved Protein Domain Family
PaRep2a
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pfam07903: PaRep2a 
PaRep2a protein
This is a family of proteins expressed by the crenarchaeon Pyrobaculum aerophilum. The members are highly variable in length and level of conservation. The presence of numerous frameshifts and internal stop codons in multiple alignments are thought to indicate that most family members are no longer functional.
Links
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Statistics
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PSSM-Id: 285186
Aligned: 6 rows
Threshold Bit Score: 193.189
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q8ZWR4  20 MAALKDWYRRCFKWPimpGEEGK-VVRRLELYYGMCEMAKAVIAEYGEKyaeplISEYALRRAFWWEGEWRGKPMSCFVT 98  Pyrobaculum aerophilum
Q8ZWQ3 161 LNAVAEWYFRCFGET---ANQLK-VAKRLEEYHTLCQMRSAAKREFGVA-----PTERALRRAFWWDGEWGGRALSCFVT 231 Pyrobaculum aerophilum
Q8ZWX7 158 YRAVAQWHRQCFGREp--MGLIEgIVKRLEEYVAMCQLYKAIKRELGGRas-lyASDFSLRRAFWWDGEWMGAPASCLIV 234 Pyrobaculum aerophilum
Q8ZXL9 158 YRAVAQWHRQCFGREp--MGLIEgIVKRLEEYFAMCQLYNFIKRELGGRas-lyASDFSLRRAFWWDGEWMGAPASCFVT 234 Pyrobaculum aerophilum
Q8ZVU1 162 LNALTEWYFRCFGETp--AHPLK-VAKRLEEYHALCQMRSAAKREFGIA-----PMERALRGAFWWEGEWRGKSMSCFVT 233 Pyrobaculum aerophilum
Q8ZU02   7 EGVISQML-----QVanpAGGGSkLVKRLELYYGMCEMAKMAIAEYGGKyaeplISEYALRRAFWWEGEWRGKPMSCFVT 81  Pyrobaculum aerophilum

Q8ZWR4  99 EKKAVCKVGDKMATFYVFDTPHGVYLRPEIKLVDDWIKVAYRGDD 143 Pyrobaculum aerophilum
Q8ZWQ3 232 EREAVCRWGGAKWKFTVRAGTDGVYIKPESPLYQEWIKAAHRGND 276 Pyrobaculum aerophilum
Q8ZWX7 235 AYEAFCQVGSAKLEFSVHYGEDGVYLEPKIPLYQDRIKVAHRG-D 278 Pyrobaculum aerophilum
Q8ZXL9 235 EREAVCKWGNAKWKFLVRTTTDGVYIKPESPLYQEWIKVVHRCGD 279 Pyrobaculum aerophilum
Q8ZVU1 234 EKRAVCKVGEKMAAFYVFDTPHGVYLRPEIKLVDDWIKVAHRGDD 278 Pyrobaculum aerophilum
Q8ZU02  82 EKKAVCKVGDKMATFYVFDTPRGVYLRPEIKLLDEWVKVAHRGDD 126 Pyrobaculum aerophilum
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