4C20


Conserved Protein Domain Family
Fucose_iso_N1

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pfam07881: Fucose_iso_N1 (This model is not part of the current CDD release)
L-fucose isomerase, first N-terminal domain
The members of this family are similar to L-fucose isomerase expressed by E. coli (EC:5.3.1.3). This enzyme corresponds to glucose-6-phosphate isomerase in glycolysis, and converts an aldo-hexose to a ketose to prepare it for aldol cleavage. The enzyme is a hexamer, with each subunit being wedge-shaped and composed of three domains. Both domains 1 and 2 contain central parallel beta-sheets with surrounding alpha helices. Domain 1 demonstrates the beta-alpha-beta-alpha- beta Rossman fold. The active centre is shared between pairs of subunits related along the molecular three-fold axis, with domains 2 and 3 from one subunit providing most of the substrate-contacting residues, and domain 1 from the adjacent subunit contributing some other residues.
Statistics
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PSSM-Id: 517941
Aligned: 35 rows
Threshold Bit Score: 179.405
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4C20_A        21 HPRIGIRPTIDGRrqgVRESLEVQTMNMAKSVADLISSTLKYPDGEPVECVISPSTIGRVPEAAASHELFKKSNVCATIT 100 Streptococcus p...
CDC04394      12 FHKIGIRPVIDPRr-aVYQAIYGQTMEMARQAADLISSSICYPDGSPVECIVNPVCISDVTEAQHCTHFFATSNVGAILT 90 
WP_013780029   3 sTPIGIVMMNDARp-hVYNLNNAENMAVVHGWADVIRQRFKNVDGSSPEVITASETITGVRVAQKIGEELRRANCRQVIM 81  Mahella austral...
CDC04496       4 KPKIGVIGFSDGEp-eVHEELKGIVQEQMDAIVKALRAS------GEVDVVEADYLVHSPEEAKLQGQKMVAEDVDGTIF 76 
2_pfamImport   1 KRKVGVITFSDGRd-fVHNDLIEMNKGFQDRLVKALEAT------GEVEVVTASDIVWKPSLAKKAGKELMKAEVEATIF 73 
Q9WYE3         4 KYRVGLISFSDGRe-yVHRELEGIVKKFEDEIAKTLEET------GEVEVIRAKEIVWKPSIAKREARRLAEEGAEVTIF 76  Thermotoga mari...
Q8XNL5         4 YPKIGIRPTIDGRqggVRESLEEKAMKMAQAAKKLIENSLYYADGTPVQCVLASRTIGGSGDAGIVQQEFTGKNIVATLS 83  Clostridium per...
6_pfamImport   1 YPTIGIRPIIDGRrfgVRESLEEKTMQMAKMAKELIESEIRYPDGTPMKCVISDCTIGGGEEAARCAQQFATQNVCATLS 80 
CDC00623       2 KPRIGIRPTIDGRwggVRESLEEKTMAMANAAKELIESNVHYQDGTPVECVISPCTIGSGAEAAKCNDYFSTQNVCATLA 81 
4_pfamImport   1 KAKLGIRPIIDGRwggVRESLEEKTMNMALAAKKLIEENVFYSDGTPFECIISPCTIGGAAEAAKCADFFSTQNVCATLS 80 
4C20_A       101 VTPCWCYGSETM-----DMSPDIPHAIWGFNGTERPGAVYLAAVLASHAQKGIPAFGIYGrDVQEASDTDIPEDVKEKLL 175 Streptococcus p...
CDC04394      91 VACGWCYPFETF-----EFDSRLPHAIWGLNSTERPGAVYLAAAKSSGNLYGLPIFSIYGkDVQIDSSEAIPVDVKEKIL 165
WP_013780029  82 CYNVWDFPYLVWpf-inSLGRDVPILSLSNNNGQYPGNVGLLATDGALRQAGIRTHRIVG-DMNDQ-------STQDQVL 152 Mahella austral...
CDC04496      77 SYGVFSFPNFSAiaakfGKGPFLLAANLNPD---WPGMVAMLAAGGALHHLGIEHFRAAG-DINDK-------EVLDKVL 145
2_pfamImport  74 NYAIWCWPHLSVmaslyAPGPFLTYGQINPS---YPGMVGQLAAAGALEQVGIMPERVWG-NPEDS-------DVIERVM 142
Q9WYE3        77 NYAVWAFPHFTVlaskfAPGPFLLFSNINPQ---YPGMVAMLSAAGALEQDGTKHYRMWG-NIKDE-------KVLRKVM 145 Thermotoga mari...
Q8XNL5        84 VTPSWCYGTETM-----DLDPNTIKAIWGFNGTERPGAVYLAAAMSGYAQKGIPAFKIYGhDVQELDDDTIPVDVQEKIL 158 Clostridium per...
6_pfamImport  81 VTPCWCYGSETM-----DLDPSTIKAVWGFNGTERPGAVYLAAVMAAHNQRGLPAFSIYGhDVQDVTDSTIPCDVKEKIL 155
CDC00623      82 VTPCWCYGSETM-----DLNSDTVKAVWGFNGTERPGAVYLAAVMAAFAQRGLPAFSMYGhDVQDIDDNTVPEDVAEKMI 156
4_pfamImport  81 VTPCWCYGSETM-----DLDPLTVKAVWGFNGTERPGAVYLAAVMAAHAQRGLPAFSIYGkDVQDVTDNSIPDDVAEKIL 155
4C20_A       176 RYARAALATGLMRD 189 Streptococcus pneumoniae TIGR4
CDC04394     166 LFARCALGVSLMKD 179
WP_013780029 153 DWLRASEAYTTMHn 166 Mahella australiensis
CDC04496     146 QFAKCAHVVNSLKG 159
2_pfamImport 143 HFVRAASAAARLKG 156
Q9WYE3       146 AFIRAGSTYKKLRG 159 Thermotoga maritima
Q8XNL5       159 SFARGAIAVGQMKG 172 Clostridium perfringens str. 13
6_pfamImport 156 RFARCACAVGVMKN 169
CDC00623     157 RWAKGAVAVGQMKN 170
4_pfamImport 156 RFARCAAAVGQLRG 169
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