3BN7,1RJJ,1Q53


Conserved Protein Domain Family
Dabb

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pfam07876: Dabb 
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Stress responsive A/B Barrel Domain
The function of this family is unknown, but it is upregulated in response to salt stress in Populus balsamifera. It is also found at the C-terminus of an fructose 1,6-bisphosphate aldolase from Hydrogenophilus thermoluteolus. Arthrobacter nicotinovorans ORF106 is found in the pA01 plasmid, which encodes genes for molybdopterin uptake and degradation of plant alkaloid nicotine. The structure of one has been solved and the domain forms an a/b barrel dimer. Although there is a clear duplication within the domain it is not obviously detectable in the sequence.
Statistics
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PSSM-Id: 400293
View PSSM: pfam07876
Aligned: 38 rows
Threshold Bit Score: 46.1301
Threshold Setting Gi: 75131480
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3BN7_A    21 LFHQVFFWLKNPGDKADR-DKLIAGLKAL-KAIDViQQLHVGVPAATEKrdvvDNS-YDVSELXVFKSVEDQ-KRYRDHP 96  Caulobacter vibrioi...
Q6YTX5   154 AVRLSLAKLKEGVEAHQL-AEKLAAATAAaGEAKG-AKVSFGENFSPAR----AKG-YQFGMVAVFDSVEGL-DAVDGDG 225 Japanese rice
Q9SYD8   116 IGKITLLKLKENVMEEAK----LEIMEVMkEKFEGiDQITVGENFSPGR----SKD-FSIGSISYFRDLGEI-EAVDD-- 183 thale cress
Q9SIP1   158 VAKLTLLKLKEDVADEAK-SEITGVIKGLsEKFPGiDQITVGENFSPAR----AKG-FSIASIAYFKDLSEM-EAVDAQK 230 thale cress
Q9SYD8     5 VEHVVLFKLNDDDVDSGKiNSMVNGINEL-VNLDQvLHLYCGSIHRLITt---TASdFTHVLHSRYRSKEDL-NAYAIHP 79  thale cress
Q9SIP1    49 IEHIVLFKTKDDADSTKI-TSMINNLNAL-AYLDQvLHISTSPLHRISS----ATA-FTHVLHSRYESKEDL-ASYAAHP 120 thale cress
Q6YTX5    40 VEHIVLIKVRPEAASSGAaAAMVSSLQALsTAVPGlSYIHVGPVLRLRSpaaeALG-PTHVLHSRYATKPDL-AAYAAHP 117 Japanese rice
Q740A8    82 VYRTLLLAVSPDTAEDTV-ARFEADLRLMpRYVRTiTGWQLSRVEEATG----ASA-WTHVFEQLFTNVDGLmGPYLMHP 155 Mycobacterium avium...
AAK86586   2 ILHCVFLRFKAATASSEK-HAVFEAIAALkDEIPGiVDVKYGQNISPEGl---NGG-FVDGFIVTLESPEAR-DGYLAHP 75  Agrobacterium fabru...
Q7URH4    33 LRHVVMFGFKDASSEADV-QKVVDAFRNLpNEIPEiADFEYGTNNSPEGl---NDG-LTHCFLVTFSSEKDR-EAYLPHP 106 Pirellula sp.
3BN7_A    97 LLqKFV-ADCSHLWS----KVVVYDSXS 119 Caulobacter vibrioides CB15
Q6YTX5   226 KV-EAAkAIVRPLLD----DVLELEFVV 248 Japanese rice
Q9SYD8   184 -QmKLQnDKIRDYVD----DTIVVEFNV 206 thale cress
Q9SIP1   231 ELvNSQkDKVRDYVD----STIVVEFVV 254 thale cress
Q9SYD8    80 DHvRVV-KESESIRE----DIMAVDWIA 102 thale cress
Q9SIP1   121 DHvRVVkESVLPICD----DIMAVDWIA 144 thale cress
Q6YTX5   118 AHvAAVqGHVLPNAL----DSTAIDWVN 141 Japanese rice
Q740A8   156 IHwAVVdRWFDPECP----DVIVRDRVC 179 Mycobacterium avium subsp. paratuberculosis
AAK86586  76 QHvEVG-ERLVSLTDgglaGLLVFDMNV 102 Agrobacterium fabrum str. C58
Q7URH4   107 AHkAFV-EVLKPHLE----KVVVIDYWA 129 Pirellula sp.
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