Conserved Protein Domain Family
Nif11

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pfam07862: Nif11 
Nif11 domain
This domain is found mainly in the Cyanobacteria and in Proteobacteria such as the nitrogen-fixing bacterium Azotobacter vinelandii. It is found in Nif11, a protein described in Azotobacter as linked to nitrogen fixation. It also constitutes a leader peptide in Nif11-derived peptides (N11P), which are thought to be post-translationally modified microcins derived from a putative nitrogen-fixing protein. N11P sequences have a classic leader peptide cleavage motif, usually Gly-Gly, which marks the end of family-wide similarity area and the beginning of a low-complexity region rich in Cys, Gly and Ser.
Statistics
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PSSM-Id: 489246
Aligned: 96 rows
Threshold Bit Score: 30.4963
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q7V8A1         1 MAEQDLYRFLDKVQQlqkmiqsletVPGRRELLAAC--G-DHNQV----VKLARSWGFEIGRRW 57  Prochlorococcus marinus str. MI...
WP_015162674   1 MANDTVAQFQTAIQQ----------DSSLKEQLTAV--AeDFEAA----SKIAQEHGYDLSADD 48  Chamaesiphon minutus
WP_015761474   1 -mnEQLKDFLKKASE----------DESIKDELKALegL-SAEENaeqaAAIARKAGFDLSAED 52  Eggerthella
WP_013259289   1 MSISEVKRLEADAKA----------KQQVRDKLKAAg-P-DPAKL----AAIAAEMGYSLSADD 48  Desulfarculus baarsii
CAK27773       1 MALQQLDAFLEHARA----------QPELADALRQP--L-SLEDF----LRLAKGAGFQLSEQD 47 
WP_011933485   1 MTLQDLDAFLRLRET----------DAALAASLAEP--L-SIEAL----IELARGHGFQITEED 47  unclassified Synechococcus
2_pfamImport   1 MAHPSVTAFVEQASG----------SDSLKQRLQSA----DLSEL----LAIAREHDLHMGEA- 45 
WP_012409656   1 MSKESVIKLIEAAES----------NPTLLKQLHNA--Q-GPETV----LAIGAERGFQFSEAE 47  Nostoc punctiforme
WP_012409657   1 MSRESVIKLIESAEN----------DQNLLKQLYSA--Q-GPESI----LAIASTRGYKFSEEE 47  Nostoc punctiforme
WP_011932660   1 MSREGFSDFVRALER----------SPGLRRDFQNL--A-TLDAV----IELARRTGFSVSAGD 47  Synechococcus sp. CS-197
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