2DSJ,4LHM,5EP8


Conserved Protein Domain Family
PYNP_C

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pfam07831: PYNP_C (489222 is an unknown moldel)
Pyrimidine nucleoside phosphorylase C-terminal domain
This domain is found at the C-terminal end of the large alpha/beta domain making up various pyrimidine nucleoside phosphorylases. It has slightly different conformations in different members of this family. For example, in pyrimidine nucleoside phosphorylase (PYNP) there is an added three-stranded anti-parallel beta sheet as compared to other members of the family, such as E. coli thymidine phosphorylase (TP). The domain contains an alpha/ beta hammerhead fold and residues in this domain seem to be important in formation of the homodimer.
Statistics
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PSSM-Id: 489222
Aligned: 43 rows
Threshold Bit Score: 71.0712
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DSJ_B 338 VREVDAYKVGLAVLALGGGRKRKGEPIDHGVGVYLLKKPGDRVERGEALALVYHRRRG-LEEALGHLREAYAL 409 Thermus thermophilus HB8
Q7UFA6 339 VESIDCPAIGDAIISMGGGRRKTTDPVEPSVGIDLHFRVGDRVETGQPLWTVYEGQVAcPPIQPVRMSETSVP 411 Pirellula sp.
Q6MGR7 351 VGGFHTESIGVAGILIKAGRAQTTDIIAPTAGIEFHVKVGDEVNVGDTVFTLHGDDKDlLQSALPMLRSAMTI 423 Bdellovibrio bacteriovorus
Q9RX72 390 VTRVDALSVGRAVLALGGGRERKGEAIDHGVGVELLKKPGEAVGAGEAVLRLYHRGGRgLERAQALLRAGLET 462 Deinococcus radiodurans
Q8UJ08 350 LASCATRDLGMVVVELGGGRTKPSDTINPAVGISDILPLGVRVEKGEPIAVVHAASSEdAERAVKRIEDCFGI 422 Agrobacterium fabrum str. C58
Q92T50 350 LTSCKTRELGMAVIELGGGRIRPDDRIDHRVGLTGLRPLGTKVEKGEPIAFVHAADQSqAEAIAKRVVTLYAI 422 Sinorhizobium meliloti 1021
Q6LUH3 351 AYAMDTRGLGMAVVGMGGGRRVASDSIDYAVGLSDMIRLGDEVNTDTALCVIHARSEAqWQEAANAVRANITI 423 Photobacterium profundum SS9
Q74PY8 351 ITAMDTRALGMAVVALGGGRRRATDPIDYSVGLTEMARLGTRVDGQQPLAVIHANNEDdWQQEAEVVRAAITL 423 Yersinia pestis
4LHM_A 351 VSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENnWQEAAKAVKAAIKL 423 Escherichia coli K-12
Q7NRT0 351 VGAMDTRGIGMAVCALGGGRRLATDVLDFRVGLSQFVELGQNIGKDTPLMMIHAADEAsFEDAARRVKAAIRI 423 Chromobacterium violaceum AT...
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