Conserved Protein Domain Family
TraC
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pfam07820: TraC 
TraC-like protein
The members of this family are sequences that are similar to TraC. The gene encoding this protein is one of a group of genes found on plasmid p42a of Rhizobium etli CFN42 that are thought to be involved in the process of plasmid self-transmission. Mobilisation of plasmid p42a is of importance as it is required for transfer of plasmid p42a, which is also known as plasmid pSym as it carries most of the genes required for nodulation and nitrogen fixation by the symbiotic bacterium. The predicted protein products of p42a are similar to known transfer proteins of Agrobacterium tumefaciens plasmid pTiC58.
Links
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Statistics
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PSSM-Id: 489216
Aligned: 5 rows
Threshold Bit Score: 74.8799
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_010974374  4 KPALMDIDAQIEKLRERRKTLIVKSADRFARAATKSGLAEMEIADEEVDRIFDEIAARFRNGEKKQAAGSPASPRGQANG 83  Agrobacterium
1_pfamImport  1 KNSILDIDTQIEKLHERRKELLVKSAERFARAATKSGLAEMDIADTEIDQIISEITTRFRERKKGNSGGASAASHRKTNG 80 
Q92ZI1        4 KSSIADIDAQIEKLRARRRSLIVKSAERFARAATKSGLAEMEITEEELDRIFEEMAARFRKGEKKGVDHATASPHRPAAG 83  Sinorhizobium me...
WP_013913802  2 KKPSRQIREEIARLQDQLKAAETREAERIGRLALKAGLGDLEIEEDALLAAFEEAAARFRKAGGGSKPTRAAPASEPPGT 81  Afipia carboxido...
Q1QEW9        2 KKPSRQIRDEIARLQEQLKQAETREAERIGRVALKAGLGEIEIEETMLLSAFEEVASRFR---KSGGRTSKAATGVASGA 78  Nitrobacter hamb...

WP_010974374 84 ATGSETEV 91  Agrobacterium
1_pfamImport 81 GTGASTEV 88 
Q92ZI1       84 ATGTAAEV 91  Sinorhizobium meliloti
WP_013913802 82 SAGKASEa 89  Afipia carboxidovorans
Q1QEW9       79 SAGAPQEg 86  Nitrobacter hamburgensis X14
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