8PV1,8FL2


Conserved Protein Domain Family
Nop53

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pfam07767: Nop53 (This model is not part of the current CDD release)
Nop53 (60S ribosomal biogenesis)
This nucleolar family of proteins are involved in 60S ribosomal biogenesis. They are specifically involved in the processing beyond the 27S stage of 25S rRNA maturation. This family contains sequences that bear similarity to the glioma tumour suppressor candidate region gene 2 protein (p60). This protein has been found to interact with herpes simplex type 1 regulatory proteins.
Statistics
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PSSM-Id: 517882
Aligned: 127 rows
Threshold Bit Score: 156.663
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8PV1_Ce        22 SRKGKKAWRKNIDLT---EVEQGLEELNeq-iiK-GGviaekPSEELFTIDVEGDaslek-------rfskHI------- 82  Thermochaetoid...
14_pfamImport   1 NKNKKKNWRKKIDIT---DIEQGLEKKRle-lrT-GGlvkdkSDHELYFVEKKPVkrddstvhg---------------- 59 
11_pfamImport   1 NKNKKKSWNKHSDIN---DVDAFLEDVRlqertT-GGllsekSDESLFFLDAGPPkdqrvsqpae-------eqkrskgk 69 
XP_002939289   35 NKNKKKNWLRHSDVK---DVEEFLDDVRfqqrtA-GGllqdkADESLFFVDTGKPekga---------klkKK------- 94 
8_pfamImport    1 PRNKKRVWWRLAQEPlglEVDPFLEDLRlqehtS-SGwvsepPHGKLFFMDSGPKdsergrkr-tkqkrplLL------- 71 
Q8BK35         41 PRNKKRGWRRLAEEPlglEVDQFLEDVRlqertT-GGllaeaPNEKLFFVDTGFKrkeprkkrtlvqkksqRL------- 112 house mouse
XP_003464661   40 PRNKKRGWRRLAEEPlglEVDQFLEDVRlqertI-GGllseaPDDKLFFVDTGSKekeqsrkr-tkvqkksLL------- 110
8FL2_NL        41 prnkkrgWRRLAQEPlglEVDQFLEDVRlq-erTsGGllseaPNEKLFFVDTGSKekgl--------tkkrTKvqkksll 111 human
XP_056652213   75 PRNKKRGWRRLAEEPlgqEVDTFLEDVRlqeraT-GGllsetPDENLFFVDKGRGeedsk--------ikqdL------- 138 gray short-tai...
XP_002128008   14 NKNKKKNWRNKIDLT---DLEDNLDKQRle-lrT-GGlvkdkLDHELYVVEKKAGnvnelpk------------------ 70  vase tunicate
8PV1_Ce        83 -KKGLKADEIIAQRSAL----PA---VSV-RKragdepaskvsdgilpvkrqrTNY-I---THK--ELIRIKKVaDGEHE 147 Thermochaetoid...
14_pfamImport  60 --rtkykyrrLKVDQLLvpqpED---VKPaNNrnaa-------------kirrRSArQdliAKLhrKKAKLPGVcKRVEC 121
11_pfamImport  70 aWRPLRIDLILQRDSLVpi-pKD---VLAyQkpna--------------kklrRI------AEKaaQLSAKGVVtRRQKR 125
XP_002939289   95 -DAPLHIDLILQSDSKVlp-pKD---ISShQVpngr-------------klkrKQElQaklEKRg-ILSRSEKLlQARLN 155
8_pfamImport   72 -QKPLRVDLMLENTSKIpa-pKD---ILShQvpna--------------kklkRK------EQLweRLAKQGELpREVRR 126
Q8BK35        113 -QKPLRVDLALENHSKIpa-pKD---ILAhQvpna--------------kklrRK------EELweKLAKQGELpRDVRK 167 house mouse
XP_003464661  111 -QKPLRVDLILENTSKIpa-pKD---VLAhQvpna--------------kklrRK------EQLweRLAKQGELpREVRK 165
8FL2_NL       112 lKKPLRVDLILENTSKV----PApkdVLAhQVpnak--------------klrRKE-Q---LWE--KLAKQGELpREVRR 167 human
XP_056652213  139 -KKSFWIDRVLESNSKVps-pKN---ILAhQvpng--------------kklkRK------QRLweHLAQQGKQpREVRK 193 gray short-tai...
XP_002128008   71 ---qkpkykrLRVDQILvpnpKD---IKPtSKrnca-------------kfkrREArQtliAKLgkKKTPVRGRsKHVNL 131 vase tunicate
8PV1_Ce       148 --------------------TTVDIVDAT------YDPWAQDpi--epKKQdp--------vRpv-lPKPDPLKKP---K 187 Thermochaetoid...
14_pfamImport 122 s----------------------------------LDIWNQd------SKEivgnvfqkneiMehteNVT-GAAQVkrpT 160
11_pfamImport 126 llnrppvkertkkavteannNPNRDY---------YDMWr--------EEPkdtsd-pwflqQt-------GKKRVprpE 180
XP_002939289  156 krdska--------kaeasnNSGRSF---------YDIWGNDnpldfeHQg-----------KdswyLEQTKKSRVkhpD 207
8_pfamImport  127 aqaplhsppg-akarpgpraLRSSPSTTSt-----TD--NPl------ERPlagqd-pffleQt-------KKKGVerpL 184
Q8BK35        168 aqarllsppt-pkakpgpqdIIERPF---------YDLWNPdn---plDTPligqd-affleQt-------KKKGVrrpQ 226 house mouse
XP_003464661  166 aqarllnppt-pkrkpgpqdAVERPF---------YDLWAPDnpldraLLGq---------dTf--fLEQTKKKGVrrpQ 224
8FL2_NL       168 aqarl----------lnpsaTRAKPGPQDtverpfYDLWASDnp--ldRPLvg--------qDef-fLEQTKKKGVkrpA 226 human
XP_056652213  194 aqarllqpp---tpktppsdPADRPF---------YDLWAQdn---plDRPlvgqd-tffleQt-------KKKGVkrpR 250 gray short-tai...
XP_002128008  132 s----------------------------------LDIWNQe------SKEiaekvfrkneiMrhteGVV-GKAQIqrpL 170 vase tunicate
8PV1_Ce       188 TLEQKPISLAANgksvPavPKPTGGYSYNPAFTDYQQRLmeesekAIEAERKRLQELELERQKME-AAARSAAeaeaaea 266 Thermochaetoid...
14_pfamImport 161 HLNKKLGLANEV----NavEPAHPGASYNPSLEHHQDLLl----qEHNRESAKISVAEKIERAVA-TDMTQIA------- 224
11_pfamImport 181 RMNEK---PSVL----PavEVIAAGGSYNPEFFSHQALLq----eAHNVELKRQKEEDRIAKQLA-----VNK------- 237
XP_002939289  208 RLRVK---PSEV----PaiELVSSGSSYNPSFQSHQMLLl----qAHEVELKKLKEEEKIEKQLK---FPTAA------- 266
8_pfamImport  185 RLHTT---PFQV----PavEVTPSGASYNPSFEDHQTLLw----eAHEVKLQLQREEEKLELQLA---LPHAE------- 243
Q8BK35        227 RLHIK---PSQV----PavEVIPAGASYNPTFEDHQALLr----eAHEVELQREKEAEKLERQLA---LPTSE------- 285 house mouse
XP_003464661  225 RLHRK---PSSA----PavEVMPAGASYNPTFEDHQALLl----vAHEVELQRQKEAEKLERQLA---LPSPE------- 283
8FL2_NL       227 RLHTKP---SQA----PavEVAPAGASYNPSFEDHQTLLs----aAHEVELQRQKEAEKLERQLAlPATEQAA------- 288 human
XP_056652213  251 RLQTK---PSQA----PavEVIPSGGSYNPSFQAHQALLq----eAHEVELQRQKVEEKLSRQLA---FPTVD------- 309 gray short-tai...
XP_002128008  171 HLDNKFGVKQAV----KavEPAHPGASYNPTFEDHQDLMl----qEHNRESHKIAVNEKIERAIA-TNPLEIA------- 234 vase tunicate
8PV1_Ce       267 raemseweddsawegfesdgeglNIK-----------------------------AKKp--------------------- 296 Thermochaetoid...
14_pfamImport 225 -----------------------TEE-----------------------------SKEkelmeglfdegeggmd------ 246
11_pfamImport 238 -----------------------EHF-----------------------------ATEetvmkeqveglaa--------- 256
XP_002939289  267 -----------------------DAP-----------------------------TEEsrfqelceglveesevpa---- 290
8_pfamImport  244 -----------------------QAA-----------------------------TQEstfeemcqelleesdgegepg- 270
Q8BK35        286 -----------------------QAA-----------------------------TQEsvfremceglleesdgedehea 313 house mouse
XP_003464661  284 -----------------------QVA-----------------------------TQEtmfqemceglleesdgegelgq 311
8FL2_NL       289 -----------------------TQEstfqelceglleesdgegepgqgegpeagDAEvcptpa---------------- 329 human
XP_056652213  310 -----------------------KAP-----------------------------TQEsafkelceglleesdeetp--- 334 gray short-tai...
XP_002128008  235 -----------------------TDE-----------------------------SQQkewmeglfdggeeesdl----- 257 vase tunicate
8PV1_Ce       297 ---------------------------RRKTKAERNRIKRRKEEERKRKHEEAMKRKQQQLEQAKKIAAEVEERERQL-A 348 Thermochaetoid...
14_pfamImport 247 -----------edkeevvlanppvntdDRKTMQVRKREAREKEELKKKKSEWANKLKEHEIFRAKTFLSEIKEKEKNI-E 314
11_pfamImport 257 --------------seedvavgaivmaEKKTERQRRKERVEKLKVQRRQANRAKSDKRQQLFQLNSIKKTIKERETNT-K 321
XP_002939289  291 ----------aaeerseeqgtgsclqrERKTERQRKKEKEAKILRAKLHADKIKKQRIQSLFQLRSIQAALAKREGEM-A 359
8_pfamImport  271 -------earddefggakattparlaaVEKTEQQRRREKAAEMLRVQPATVRAARLQKQELFRLRGIKAHVAQQla---- 339
Q8BK35        314 gragqpeagdgtteisptgaagpekrmEKKTEQQRRREKAARKLRVQQAALRAARLQHQELFRLRGIKAQVARRLAEL-A 392 house mouse
XP_003464661  312 -----daasevggaqaapqpalpatamEKKTEQQRRREKAARTLRVQQAMLRAARLRRQELFRLRGIKAQVAQRLAEL-A 385
8FL2_NL       330 ----------------------rlattEKKTEQQRRREKAVHRLRVQQAALRAARLRHQELFRLRGIKAQVALRLAELaR 387 human
XP_056652213  335 ---------aepgdgdadgpaprppgpEKKTEQQRRREKEARKLKAQQAAERAARKRRQEVFQLRGIRLQVAQRLTEL-A 404 gray short-tai...
XP_002128008  258 ----------eedddegirvnppvsteDRKTRKVRKREAREKDELKKKKIEWENKLKEHEIFRTKTFLSEIKQKEKKM-E 326 vase tunicate
8PV1_Ce       349 LQKIEMsddsEegddtvLRRKQLGKFKLPEKDLELVLPDELEDSLRRLKPEGNLLKDRYRSM 410 Thermochaetoides thermophila DSM...
14_pfamImport 315 LKkerrkl---kkkmpvL-----SGIKYVEPDQDVQLSSELKGSLRQLKPEGNLIFDRYKSL 368
11_pfamImport 322 VKqeqrks---nqeaekAQPRRLGKLKFQPQDMEVQLSNELAGSLRRLKPEGSVLKDRFKSL 380
XP_002939289  360 RRkalkae---krkkeaLQPRRLGRLKYKDPEIDVLLSDELPESLRKLKPEGNIATDRFKSF 418
8_pfamImport  340 ---------------eaDKPRRLGQLKYQAPDINM----DLANSLPTLKPEGNILCDRFKSS 382
Q8BK35        393 RRreqrri---rrlaeaDKPRRLGRLKYQAPDIDVQLSSELSGSLRTLKPEGHILRDRFKSF 451 house mouse
XP_003464661  386 RRreqrrl---krlaedDKPCRLGRLKYQAPDIDVQLSSERSDSLRALKPEGNILQDRFKSF 444
8FL2_NL       388 RQRRRQ----ArreaeaDKPRRLGRLKYQAPDIDVQLSSELTDSLRTLKPEGNILRDRFKSF 445 human
XP_056652213  405 RRrerrrl---krlaedEKPRRLGRLKYQAPDIDVQLSTELADSLRKLKPEGSILRDRFKSF 463 gray short-tailed opossum
XP_002128008  327 LRkakrql--------rdrmpvLSAVKYVEPDQDVQLSSDMRGSLRQLKPEGNLIFDRYKSL 380 vase tunicate
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