Conserved Protein Domain Family
DUF1612

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pfam07756: DUF1612 (This model is not part of the current CDD release)
Protein of unknown function (DUF1612)
This family includes sequences of largely unknown function but which share a number of features in common. They are expressed by bacterial species, and in many cases these bacteria are known to associate symbiotically with plants. Moreover, the majority are coded for by plasmids, which in many cases are known to confer on the organism the ability to interact symbiotically with leguminous plants. An example of such a plasmid is NGR234, which encodes Y4CF, a protein of unknown function that is a member of this family. Other members of this family are expressed by organisms with a documented genomic similarity to plant symbionts.
Statistics
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PSSM-Id: 517873
Aligned: 11 rows
Threshold Bit Score: 120.177
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015934123 221 VRDPQYGEAERLAAWRRIaLKDVQELPTVLAAAVALDAWFALDPSERQPFLGPLLAAALLHQRG-TARHHLPALALGLRE 299 Methylobacteriu...
Q2YKW5       169 LYDDDWDEDARLQEWRDC-CAATADLPPLLRAAIMHDAWFSLEVVQRSAWVGRLLTAAFLRQSG-LAANHLPAISLGPRN 246 Brucella abortu...
Q92XB7       199 LFDDDWDETARLDAWRAV-LPVADQLPAALGAALLFDAWERIEPLRRQHWLGSLLVGAYLRFRG-KVGSHVLAYNTGLKT 276 Sinorhizobium m...
WP_010974841 183 VRDPGWDEEGRLSAWRAV-LAQADALPTTLAAAVIWDAWESMEPLQRQHWLGTQLVNSYFRVRG-KVSSHLFGICSGLKA 260 Rhizobium/Agrob...
WP_013650750 187 IRDPDWDEAERLSQWRSV-LKCAETLPPALAAVLLYDAWESLEPVQRQHWLGGQLVVAYLRSSG-KIISHLLAYNVGLKA 264 Polymorphum gilvum
Q1QFB1       218 VYDLDWDEEERLDAWRAV-IDQTRTLPPTLAAAIAADAWSAIEPLQHTPWIGRLLAASVLRQRG-KTRSHLACLHDGLKA 295 Nitrobacter ham...
Q1QFV4       128 IYEPGWNESERLLAWRTA-ISEVEKLPALIAAAIAWDQWLRLEPIQRSSWRAGLMAALILRSKG-KTKYHLAAVDCGGRY 205 Nitrobacter ham...
1_pfamImport   2 IRDPDWDEEERLEEWRTV-LRSINDLPPVLQAILALDAWNELAVLQRAPWLGRLLAASLLRREGlTSQAHLLAFNAALKT 80 
WP_012655027 179 IYEEDWDEDERLEQWRSL-FIETEGLPPVLRSALLLDAWNRIEVLQHRAELGRQLVASLLRRDG-TTPAHLPALNIGLRS 256 Allorhizobium a...
WP_234643534 183 VYDPDWNEEARLAEWQTL-LGDVQALPPVLAAACLLDAWQSQEVSEHSPWLGRLLAAAYLQKAG-VAKFHLPALSIGLRA 260 Allorhizobium a...
WP_010973501 185 INEPDWDEDERLKEWWDV-HARTQELPAILRTAVLLDAWNIIEVLQRSPWLGRLLAAAFLREGT-VTPDHLPALSIGLRA 262 Agrobacterium f...
WP_015934123 300 SRTRWLTVHPAPERLGAILRAVEAAAHAAGRDLDRLSLARELMLRRAQ 347 Methylobacterium nodulans
Q2YKW5       247 KRPDERRSSNRVVRLKTFLAAIEEAAEAIMKEHDRLMLAREQMQRKLK 294 Brucella abortus 2308
Q92XB7       277 IRHERRRSKDRLTRLTGFLEAMSAAAELGMKELDRLSLARTQMEMRIR 324 Sinorhizobium meliloti
WP_010974841 261 VPRERRRSHNRASRMLAGLDAMASSAELAMKEVIRLGQAREHLERKLK 308 Rhizobium/Agrobacterium group
WP_013650750 265 VPRERRRARERTTRLLAFLEAMSIAAEAGMKEIVRLNQARDQMERRMR 312 Polymorphum gilvum
Q1QFB1       296 IPRERRRPRDSAGRLAVGLEAIAAAAAAGLKEHDRWLMARTLLTRKLD 343 Nitrobacter hamburgensis X14
Q1QFV4       206 AKYRRASHHQPYERIVGFLEWIETAASAGYKELDRLALAHRVMSLKLK 253 Nitrobacter hamburgensis X14
1_pfamImport  81 IRVERRRHRNFETRLHASLDGLIAGIEACFKEHDRLLLARQMMERRLL 128
WP_012655027 257 VRRERRHAGSQLTRTLAILDAFTAAAELGMKEHDRIVLARQQLDRQAs 304 Allorhizobium ampelinum
WP_234643534 261 VPREQRQSPNRTQRLIAILEAFEKSAQLGLKEHDRLILARGNLERRTi 308 Allorhizobium ampelinum
WP_010973501 263 VPRERRHARNQTQRLSALLDCFYEAAQASLKEHDRLSHARERMMRKLT 310 Agrobacterium fabrum
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