6TH6,9E71


Conserved Protein Domain Family
HVO_2753_ZBP

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pfam07754: HVO_2753_ZBP (This model is not part of the current CDD release)
Small zinc finger protein HVO_2753-like, Zn-binding pocket
This domain is found in many archaeal proteins, including HVO_2753 (also known as Small CPxCG-related zinc finger protein) from Haloferax volcanii. NMR 3D structure analysis revealed the content of four C(P)XCG motifs, suggesting the presence of two zinc-binding pockets (ZBPs). However, only C(P)XCG motifs 2 and 4 (comprising Cys-32 to Cys-35 and Cys-50 to Cys-53) form a ZBP and binds one zinc atom, while C(P)XCG motifs 1 and 3 (comprising Cys-12 to Cys-15 and Cys-39 to Cys-42) form a four-Cys cluster that do not bind zinc. The four C(P)XCG motifs are critical for protein stability, folding and functionality. This domain can also be present in small zinc finger proteins from bacteria and eukaryotes.
Statistics
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PSSM-Id: 517871
Aligned: 11 rows
Threshold Bit Score: 55.5196
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6TH6_Az 13 CTSCGKEITPREHATHFVCPNCGEAIIWRCESCRVLSVPYKCPKCG 58  Thermococcus kodakarensis KOD1
P81308   8 CISCNAEIAPREKSTKFPCPNCGEVEIVRCERCRKLNNPYKCPKCG 53  Methanocaldococcus jannaschii DSM 2661
Q6LXF1   5 CTSCNAEIAARENATKFLCPNCGKAEIIRCEKCRKLSNGYSCPVCG 50  Methanococcus maripaludis
Q976H9  18 CSSCGKLIHPREKGVEFYCPNCGEIIIRRCYYCRKHIVSYTCPKCG 63  Sulfurisphaera tokodaii
Q8ZYN6  16 DTTTNWVLAPLERGVVFACPNCGKTTIIRSARSRKLGVTYRCPECG 61  Pyrobaculum aerophilum
O29682   7 CVSCGAVLV-GANYVAFPCPECGE-MIYRCKKCRRLSNPYVCESCG 50  Archaeoglobus fulgidus
Q9HKN0   7 CTSCGVGLI-DEGYSVFLCPNCGNEVIGRCKTCREHSTPYVCDNCG 51  Thermoplasma acidophilum
Q6KZV4  10 CTSCGIGLV-EPGYSIFDCPNCGEAVIGRCKQCREHSTDYVCPKCG 54  Picrophilus torridus
Q8TYN7  15 CSACGGPIAPGERAVSHPCPKCGEVVITRCQKCRRLGNRYQCPNCG 60  Methanopyrus kandleri
Q8TZM6  11 CTSCGREITPREHATHFICPNCGEAVIWRCESCRVLAKPYKCPNCG 56  Pyrococcus furiosus
9E71_Bc 16 DSTTNWPLAPLERGVVFACPNCGKTTIVRSARARKLGVPYRCPECG 61  Pyrobaculum calidifontis JCM 11548
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