6CNB


Conserved Protein Domain Family
BRF1

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pfam07741: BRF1 
Brf1-like TBP-binding domain
This region covers both the Brf homology II and III regions. This region is involved in binding TATA binding protein.
Statistics
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PSSM-Id: 400202
View PSSM: pfam07741
Aligned: 141 rows
Threshold Bit Score: 49.4648
Threshold Setting Gi: 124450497
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6CNB_R       603 EDVDDE-ELN-AHLLNEEASKLKERIWIGLNADFLL---E-QESKRLKQEADIAT-------GNTSvkkkrtrrrnntrs 669
EKD04282     529 DDLDDD-ELDkYWVMSEDERQTRARMWLSHNGKWLEedkE-RQERKAEYNRQHGIdp---nkPPPK-------------- 589 Trichosporon as...
Q5KFT1       553 DDLDDD-ELEaVFVLDEDAKQARARMWLSSNGKWLEeekE-KQEKRAALQRARGN-------DPSK-------------- 609 Cryptococcus ne...
A0E531       335 SEIDEQ-----EYILNEQEKANKQIVWSALNKEYIYdieLkNQKKKAQQEKNLLSgn----kQQTQ-------------- 391 Paramecium tetr...
A0DUG6       335 SESDEQ-----EYILSEQEKACKQLVWQTMYKEYIYdkmN-RNQKQDKQQKNLQSgn----kQQNQ-------------- 390 Paramecium tetr...
ESS29369     693 DDSAEE-EIR-AMFLSESEQRAKALIWDELTKDVMPlvhRrLKEKKLREREMMLN--------QSK-------------- 748 Toxoplasma gond...
Q4UC65       427 DDEDDIaMFK-EMILPENERKMKMILWDEVTKDIMPkvyRrQMERKRREQLGQNV------------------------- 480 Theileria annulata
EDO05869     418 DDEDDErEFS-KMILSPEEKEAKTLLWDEVTKDIMPevwRrQAERKRKEALGKTV------------------------- 471 Babesia bovis
XP_002260380 738 SDFYDS-EIE-NIILSEKERKRKMLIWDDMMKSYFPqyyK-QFKKQKKKRSSYHTdlvgadkSKKK-------------- 800 Plasmodium know...
XP_001615897 719 SDFYDS-EIE-NIILSEKERKRKMLIWDDMMKSYFPqyyK-QLKKQKKKRSSYHPdrvgaekSRKK-------------- 781 malaria parasit...
6CNB_R       670 deptktvdaaaaiglmsdlqdKSGLHAALKAAEes------gdFTTADSVKNMLQKAs--FSKKINYDAIDGLF 735
EKD04282     590 ---------------------KKKRKSNAEKQKgp-------yVSTHAAMEAFATQKk--FSTRINQEVLKRIS 633 Trichosporon asahii v...
Q5KFT1       610 ---------------------NKPKRKRTAPHKgp-------yKSSDQAVQSVIKSKq--FSGRVNYDVLRGLG 653 Cryptococcus neoformans
A0E531       392 ---------------------KARKQAKVEKSF----------PTPQESVAKNYENDg------INPQAVKNLF 428 Paramecium tetraurelia
A0DUG6       391 ---------------------KPKKQVNVKQSF----------ATPQESVTNNYQNDg------INPQAVQNLF 427 Paramecium tetraurelia
ESS29369     749 ---------------------RKRLQSTGRRSRfgsdagsapaASAAESVRLALQMSsrsIVGKINDDALNSLF 801 Toxoplasma gondii VEG
Q4UC65       481 ---------------------KKRKYVRRVYSEyp------eaQDAVESARMALERHakgFMNHVNKDVFKSLL 527 Theileria annulata
EDO05869     472 ---------------------KKRKYCRKTYSDyp------eaQNAAESTRMALERHakhFSNRMNQEFLDSIL 518 Babesia bovis
XP_002260380 801 ---------------------KKKEQEQEQNDHhpl-----deQTTGESVIMALEKSdksMSTKMNYDVLKSLF 848 Plasmodium knowlesi s...
XP_001615897 782 ---------------------KKKE-----NDDhpl-----deQTTGDSVIMALEKSdksMSTKMNYDVLKSLF 824 malaria parasite P. v...
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