4P9F,3C7J


Conserved Protein Domain Family
FCD

?
pfam07729: FCD (This model is not part of the current CDD release)
FCD domain
This domain is the C-terminal ligand binding domain of many members of the GntR family. This domain binds to a range of effector molecules, including Lactate, Zn(II), Ni(II), Ca(II), Mg(II), citrate, sugar acids, sialic acid and N-acetylglucosamine-6-P, that regulate the transcription of genes through the action of the N-terminal DNA-binding domain pfam00392. This domain is found in regulators of sugar biosynthesis operons. It is also in the known structure of FadR where it binds to acyl-coA, the domain is alpha helical. This family has been named as FCD for (FadR C-terminal Domain).
Statistics
?
PSSM-Id: 517851
Aligned: 146 rows
Threshold Bit Score: 36.9764
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4P9F_A         78 EINRIRYELELXAVALAVENLTPQDLAELQELLEKLQQAQEKGDXEqIINVNRLFRLAIYHRSNXPILCEXIEQLWVRXG 157 Escherichia co...
Q63KE6         97 hLLAVRRAIEAEVAAEAALCRTDEDMEDIDAALAKIDDAVAEGRD--GVAEDVAFHRTIASVTGNPYFLKTLSFLNQYLE 174 Burkholderia p...
WP_011754313  111 NLVETRLGIELAIVTALAERGTDADFDALEALLDEQQEHLENDPS--YQWEPLGFELTAAGMCGNSWLYDVELLLRDAWV 188 unclassified N...
P9WMG7        108 ELLEIRAALGPLIGRLAAARSTPEDAEALCAALEVVQQADTAAA---RQAADLAYFRVLIHSTRNRALGLLYRWVEHAFG 184 Mycobacterium ...
WP_011690050  108 ELVDVRQALESGLIGSAMDLMTAGQRDDLRSALAAMEDAAARGEP--LFIHDAEFHRRLFAPLRNDLLMNLMDVFWKVYR 185 Arthrobacter s...
Q9CK70        101 DILDVREILQYGFAPIALQKINAEEVLQLQSLVRLLEENAQQGRF--SIKEEQQIHLLMYQSVQNHLLTQYLDAFWQIYQ 178 Pasteurella mu...
Q8FMI5         88 HVVETREILDLALGTELLRTFDGQLRNDLLGYVDRMREHSEKGES--FAAEDRSFHLTLASKVGNPLIRELNDAFWRIQA 165 Corynebacteriu...
Q89NG3         76 DLLRFRLALEPACVAEAIESAPDSVLKSLDEFRRFAGNHED------FIAYNRAFHSALAHASGNRRMATALCDLIGQAD 149 Bradyrhizobium...
jgi:Noca_2132 108 EVMEVRVQLERWSAHEAAQAAGRGNLEDLDRLLEAMKSPEIESAR--FNAIDAAFHLGLAEAADNRLLATLMSAIRDAVQ 185
Q82AN5         81 ESYPVRAGLEAIAAELAAGRLA-EDCSALEPHVAALYEADRHADGTaQVRHTVAFHRELVRAAGNSVLLHTWEGLGIEVF 159 Streptomyces a...
4P9F_A        158 P---GLHYLYEa--iNPAELREHIENYHLLLAALKAKDKEGCRHCLAE 200 Escherichia coli UMEA 3718-1
Q63KE6        175 AgvkVTRGNEAt---REDFSRQVREEHAAIADAIRARDPSAAGNAARA 219 Burkholderia pseudomallei
WP_011754313  189 T---LSRGTRT----RVSRHREWHSEHRAILASMRTRNVRQAQRLVMA 229 unclassified Nocardioides
P9WMG7        185 G---REHALTG----AYDDADPVLTDLRAINGAVLAGDPAAAAATVEA 225 Mycobacterium tuberculosis H37Rv
WP_011690050  186 Q---IHLELGP----GPVDLGKQVQDHADIYQAVAAGDKALASERLQR 226 Arthrobacter sp. FB24
Q9CK70        179 Q---LDAELPA----ILISPTDLAMQYREWVDAIEARDLERVQRAVLY 219 Pasteurella multocida
Q8FMI5        166 E---SQPLLSLp---MPADIHQTIDAHQEIVEALNAADPERYEAAVKN 207 Corynebacterium efficiens
Q89NG3        150 R---LVRVSISn--lRGHDPAKLVAEHVALIDAMQSRETRTAARIIKA 192 Bradyrhizobium japonicum
jgi:Noca_2132 186 R---EMAAAFAdlanAPAVMSQLASEHAAILEAVRGGKAEEAADLVQA 230
Q82AN5        160 ----TALSIRW----LGTVQQSYAEEHEALVDAFRRRDPLIAEL-VKA 198 Streptomyces avermitilis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap