Conserved Protein Domain Family
5TM-5TMR_LYT

?
pfam07694: 5TM-5TMR_LYT (489122 is an unknown moldel)
5TMR of 5TMR-LYT
This entry represents the transmembrane region of the 5TM-LYT (5TM Receptors of the LytS-YhcK type).
Statistics
?
PSSM-Id: 489122
Aligned: 55 rows
Threshold Bit Score: 79.5367
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q65GA8         25 MKVFRQH-L-QHPE-GYKGKGVLIFIFSLFSIISNYTGIEIRereilnndwifaidpSsSIANTRILGVEIGGLIGGPFV 101  Bacillus lich...
Q07ZC7         21 VYVYSLSpThQRKVaPFLWQFLMGAVIGTIGVVIMMDPLVHq--------------qD-ILFDARTVVLCLSGLFFGGIP 85   Shewanella fr...
WP_011760559   20 VYLYDAIpWlKQQRiRWVWHIMLGLVIGAIGMTIMSARYEFa--------------eG-IYFDTRGVLLSVSGLYFGAVP 84   Shewanella am...
Q3A1G1         19 AFIYDMMtSrYRLKhRLIVQICVGISLGLLSIILMLSPWQYi--------------pG-IVFDTRSVLLGISGLFFGAVA 83   Pelobacter ca...
Q5HQY3         16 IYLFHRLqYsENKR-MIFSKEYVTVLMTFVSLLLAAYPIPFQ---------------NeYLVHLTFVPLLFLGRYTNMIY 79   Staphylococcu...
WP_011529710   15 FTSIGSLtYtGREDyHTLRRALRYLISVLAGIILVLYGVPLm--------------eG-VRVDFRGVPILLAGLFGGPLP 79   Deinococcus
Q9RYX3         21 VYLLSLTyKsAADLaDSRLQVPRFLLVSLMCVPLMFFPAQVa--------------pG-VFVDLRAVPIAFLTLRLGWGW 85   Deinococcus r...
Q9RVD9         16 MYLLSLTyKsAEDItATAIHVPRLLLLAVMAVVLMLYPAEVa--------------pG-VIIDMRAVPIAYLALRKGVWA 80   Deinococcus r...
WP_012179584   22 GFAYSRVqRmMRH--PRGSEAFLGAIFGLSAITQMLRPFEPm--------------eG-LLIDLRNIPIALAGAFLGWRG 84   Dinoroseobact...
Q3J0V4          5 IALIYGS-VqRLGLsRRLRHVLLGLAFGFGASVQMMQSIAVa--------------pG-VIVDSRALFIGFAGAFLGPLG 68   Rhodobacter s...
Q65GA8        102 GAGVGLLSGIHRFSLGGTTALSCAVSSLLAGVIAGYIGSFFRNr----hQMVTPRVAALAGICMEGlqMLMILVLAKPQA 177  Bacillus lich...
Q07ZC7         86 TLVATIIMALYRYHLGG-VAVWVGICALSSSALIGLI---WRRyrrhelDQISYREFYLLGVIVHS--LLLLWLFLLPFD 159  Shewanella fr...
WP_011760559   85 TLIASAMMAIYRYGMGG-PAMVAGIAGIAFAAAMGIL---WRIpwqknlIEVSTGSLLLLGMLVNI--GSLLCFFIMPFD 158  Shewanella am...
Q3A1G1         84 TSVAMLMAAAFRLFQGG-AAAWIGVGVIFASGIVGIY---WKYrnrksaEQLTWWQLYGFGVLVHL--IMLAFMLLLPWQ 157  Pelobacter ca...
Q5HQY3         80 TLTAAFIVSLVDVFIFG-NSIIYGITLIVIAGIVSAVGPFLKQn-----DIISLLILNLISII-----ILLFLALLSPIY 148  Staphylococcu...
WP_011529710   80 ALAVALPIMAYRLWAGGTGAHAGVLSILLVALCAGMLHARFAQnrltwrDAWVPFAIFALANL----------SILLVPS 149  Deinococcus
Q9RYX3         86 GLVGAVPLLVYRYLLGGVGWPPAMVSAIGVVLVAGLFHGRLGLfrpqwpWERLLLPLLLIFLPNG--------LLLPIIR 157  Deinococcus r...
Q9RVD9         81 GLLALIPLLLYRFHLGGVGTWSAVFSAVGVVLLGGLLHRSVDLsaprldWRSLWWRLLLVFMPNG--------ILIPVLR 152  Deinococcus r...
WP_012179584   85 AAACLAVTVATRLYVGG-VGMWAGALGMVLALAAGIYWARKTKgaerrgILALLSLALLMSAHLVA-------ALILPEA 156  Dinoroseobact...
Q3J0V4         69 ATVALMVSLLLRISLVSTAMPALAAGSMAASALMGSLWPVLRRrlglghFTGLVLLAVMISLP-----LVLLAWLPVGRT 143  Rhodobacter s...
Q65GA8        178 EALALVQMIGIPMMIVNGTGSFIFLSIIQSI 208  Bacillus licheniformis DSM 13 = ATCC 14580
Q07ZC7        160 QALDALRTVSLPIMMVLPLLTMIIGHLLAKI 190  Shewanella frigidimarina NCIMB 400
WP_011760559  159 LAWELVSTIGTTVMLVCPLATLLLARLLARR 189  Shewanella amazonensis
Q3A1G1        158 TAFRVLHHISLPVLLIYPLATAMLGSLMLKR 188  Pelobacter carbinolicus DSM 2380
Q5HQY3        149 ELVEI--LVLIPISFIITIASAITFVDIWhf 177  Staphylococcus epidermidis RP62A
WP_011529710  150 AGPQLLRTAWLPVTLLQGLATLVAFTVVSLR 180  Deinococcus
Q9RYX3        158 HDLSLYLTVWLPLLVMCFLGALITLGILRSR 188  Deinococcus radiodurans
Q9RVD9        153 GDPAALLTVYLPLLVVTYAGFLVSLGIQRNR 183  Deinococcus radiodurans
WP_012179584  157 ARTLFLAQAALPIFLVNMIAMPIAASILERE 187  Dinoroseobacter shibae
Q3J0V4        144 DSLEVLAAIL---VLLNLTGALVFGTFLQRE 171  Rhodobacter sphaeroides 2.4.1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap