5JWR


Conserved Protein Domain Family
KaiA

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pfam07688: KaiA 
KaiA C-terminal domain
The cyanobacterial clock proteins KaiA and KaiB are proposed as regulators of the circadian rhythm in cyanobacteria. The overall fold of the KaiA C-terminal domain is that of a four-helix bundle, which forms a dimer in the known structure.
Statistics
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PSSM-Id: 489118
Aligned: 18 rows
Threshold Bit Score: 223.728
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5JWR_E              23 ERLGYLGVYYKRDTAFFFRRMSPADKRKLLDELRSIYRTIVLEYFNTDAKVNERIDEFVSKAFFADISVSQVLEIHVELM 102 Thermosyn...
WP_015202682       182 ERLGYLAVYYKRSPQNFFRNLSPNEKTLFLDNLKSKYCEIILTYFDNDPKLNQEIDDFVNLGFFADLSVSQIVEIHMELM 261 Crinalium...
WP_015173270       176 ERLGYLGVYYKRDSRYFLRHLSLQEKQELLDKLRFTYREIILGYFSQDDQLNQKIDEFVNLAFFSDIPVTQIVEIHMDLM 255 Geitlerin...
WP_015158121       177 ERLGYLAVYYRRNPSQFFRHLDRRQKQELLDALKLQYRHIVLEYFADSTQIDLQIDEFVSAVFFRDLAVSEIVKIHMELM 256 Chamaesip...
Q6L8L3             177 ERLGYLGVYYKRNPQQFFHKLTEEEQTDYLVTLKRDYRDIILNYFRQDSSVNQEIDDFVTQIFFADISILKILEIHMELM 256 Acaryochl...
Q79V62             161 ERLGYLGVYYKRDTAFFFRRMSPADKRKLLDELRSIYRTIVLEYFNTDAKVNERIDEFVSKAFFADISVSQVLEIHVELM 240 Thermosyn...
WP_015123056       179 ERLGYLGVYYKREAQQFFRHMPATTKAKFLDELQANYRQIILEYFHQNSNVNTLMDAFVTKAFFADISVSQVLEIHIELM 258 Synechoco...
WP_015180366       183 ERLGYLGVYYKRNPQLFLRHLPPSERQKILENLKSEYRQIVLKYFSQDNTLNQRIDNFVDKSFFADISVSRIVEIHMELM 262 Allocoleo...
EKQ67609           168 ERLGYLGVYYKRDPKNFFRHLPPEQKHQLLEKLKTDYRDIVLRYFANDGTLNQRIDDFVNTAFFTDVSAAQIVEIHMELM 247
jgi:Oscil6304_1437 224 ERLGYLGVYYKRNPKRFLRNLPPAERQHFLDELQAEYRDIVLNYFSTDGSLNQKIDEMVSTAFLADISVTQIVEIHMDLM 303
5JWR_E             103 DTFSKQLKLEGRSEDILLDYRLTLIDVIAHLSEMYRRSIPRE 144 Thermosynechococcus vestitus BP-1
WP_015202682       262 EQFSQQLKIEGRSEEILLDYRITLIDIISHLCEMYRRSLPKE 303 Crinalium epipsammum
WP_015173270       256 DEFSKQLKLEGRSEDILLDYRLTLIDTIAHLCEMYRRSIPRE 297 Geitlerinema sp. PCC 7407
WP_015158121       257 EEFSDQLKLEGRSEEILLDYRLTLIDIIAHLCEMYRRSIPRE 298 Chamaesiphon minutus
Q6L8L3             257 DAFAKKLKLEGRNEDILLDYRLTLIDIMAHLCEMYRRSIPKt 298 Acaryochloris marina MBIC11017
Q79V62             241 DTFSKQLKLEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPRE 282 Thermosynechococcus vestitus BP-1
WP_015123056       259 DNFAKQLKLEGRNEDILLDYRLTLIDVIAHLCEMYRRSIPRE 300 Synechococcus sp. PCC 6312
WP_015180366       263 EEFSKQLKLEGRSEDILLDYRLTLIDVIAHLGEMYRRSIPRE 304 Allocoleopsis franciscana
EKQ67609           248 DEFSKQLKLEGRSEEILLDYRLTLIDTIAHLCEMYRRSIPRE 289
jgi:Oscil6304_1437 304 DDFSKQLKLEGRSEEILLDYRLTLIDIIAHLCEMYRRSIPRD 345
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