6JO8,5DZN,1U9K,2ZG2,3BIK,1I9E,2UWE,1KJ2,2H32,1OAZ,2ATP,5FDY,6J8H,4FRW,4BFI,1HNG,1HNF


Conserved Protein Domain Family
V-set

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pfam07686: V-set 
Click on image for an interactive view with Cn3D
Immunoglobulin V-set domain
This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.
Statistics
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PSSM-Id: 400157
View PSSM: pfam07686
Aligned: 58 rows
Threshold Bit Score: 51.6877
Threshold Setting Gi: 584905
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6JO8_N 145 DGEKEvLAVARGAPALLTCvnrghVWTDRhVEEAQQVVHWDRQPPGvphdrADRLLDLYASgerrAYGPLFLRDRVAVGA 224 human
Q9R121  32 IELVP-PMVAEGGNSVLFV-----HEMPL----NVQAFYWYKQRDPt----KSYEVARYLT----PTNESSKMPQHSGRK 93  Norway rat
Q3LFS9  38 ieavP-PQVAEDNNVLLLV-----HNLPL----ALGAFAWYKGNTTa----IDKEIARFVP----NSNMNFTGQAYSGRE 99  house mouse
Q9JHL7  38 vdavP-PNVVEEKSVLLLA-----HNLPQ----EFQVFYWYKGTTLn----PDSEIARYIR----SDNMSKTGPAYSGRE 99  Norway rat
O75871  38 IEALP-SSAAEGKDVLLLA-----CNISE----TIQAYYWHKGKTAe----GSPLIAGYIT----DIQANIPGAAYSGRE 99  human
Q3KPI0  38 IASAP-FEVAEGENVHLSV-----VYLPE----NLYSYGWYKGKTVe----PNQLIAAYVI----DTHVRTPGPAYSGRE 99  human
P06731  38 iESTP-FNVAEGKEVLLLV-----HNLPQ----HLFGYSWYKGERVd----GNRQIIGYVI----GTQQATPGPAYSGRE 99  human
P08920  23 RDNET-IWGVLGHGITLNI-------PNFqMTDDIDEVRWVR---------RGTLVAEFKR----KKPPFLISETYEVLA 81  house mouse
P37998  25 KKNIT-ILGALERDINLDI-------PAFqMSEHVEDIQWSKGKTK---------IAKFKN----GSMTFQKDKTYEVLK 83  horse
1HNF_A   4 TNALE-TWGALGQDINLDI-------PSFqMSDDIDDIKWEKTS-------DKKKIAQFRK----EKETFKEKDTYKLFK 64  human
6JO8_N 225 daFERGDFSLRIEP-LEVADEGTYSCHL-HHHYCGLhERRVFHLTVA 269 human
Q9R121  94 --TVFYSGSLLIRN-VTQADSGVYTLLT-FNTEMQS-ELTHVHLEVR 135 Norway rat
Q3LFS9 100 --IIYSNGSLLFQM-ITMKDMGVYTLDM-TDENYRR-TQATVRFHVH 141 house mouse
Q9JHL7 100 --TIYSNGSLFFQN-VNKTDERAYTLSV-FDQQFNP-IQTSVQFRVy 141 Norway rat
O75871 100 --TVYPNGSLLFQN-ITLEDAGSYTLRT-INASYDS-DQATGQLHVH 141 human
Q3KPI0 100 --TISPSGDLHFQN-VTLEDTGYYTLQV-TYRNSQI-EQASHHLRVY 141 human
P06731 100 --IIYPNASLLIQN-IIQNDTGFYTLHV-IKSDLVN-EEATGQFRVy 141 human
P08920  82 ------NGSLKIKKpMMRNDSGTYNVMVyGTNGMTR-LEKDLDVRIL 121 house mouse
P37998  84 ------NGTLKIKH-LERIHEGTYKVDAyDSDGKNV-LEETFHLSLL 122 horse
1HNF_A  65 ------NGTLKIKH-LKTDDQDIYKVSIyDTKGKNV-LEKIFDLKIQ 103 human
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