4IXM


Conserved Protein Domain Family
CobW_C

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pfam07683: CobW_C (This model is not part of the current CDD release)
Cobalamin synthesis protein cobW C-terminal domain
This is a large and diverse family of putative metal chaperones that can be separated into up to 15 subgroups. In addition to known roles in cobalamin biosynthesis and the activation of the Fe-type nitrile hydratase, this family is also known to be involved in the response to zinc limitation. The CobW subgroup involved in cobalamin synthesis represents only a small sub-fraction of the family.
Statistics
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PSSM-Id: 517820
Aligned: 146 rows
Threshold Bit Score: 33.7621
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4IXM_A       224 ISSIVVELDYPVDISEVSRVMENl--lLesADKLLRYKGMLWIDGE-PN-RLLFQGVQRLYSAD-WDRPW-GdekPHSTM 297 Escherichia col...
Q2J3W5       221 FRSWAYRRDGAFDRARIAGALAA----L--PPELLRLKGSCRLAGE-AG-AHVFQLVDRAWSLTpPAPDQpV----SPGI 288 Rhodopseudomona...
Q7WC50       233 FHSSTLATEHRFDRRRIEYALDA----L--PQTVLRGKGFVELEGE-AT-PALLQLCGSRWTLDpVSTPApP---AGTHL 301 Bordetella para...
WP_011700407 533 LISRTIRVPRVLDRQAFITAIES----L--PSPIFRVKGLIELSAP-RQ-TTLLQYVAGRWDITpFPDPQtQ----DRFL 600 Syntrophobacter...
WP_011699572 209 FQSFVFTSRVLLDDRKFHKLVSE----L--PECVYRAKGFARFPGG----SYLFNFVVGRVDIEaf-------paDRTQL 271 Syntrophobacter...
4_pfamImport   1 WQSFMIRSHDAQDADTLRHAVAAitrsE--P--ILRAKGFARAGAG----RVLIQAVRNRVEARlepd---aappKQAQL 69 
WP_011525698 274 WQSFRLTSDEAQNLPELVRTVQNvarvF--P--VLRVKGFVQ--GE-DGgRYAVQAVRSRVETHaAPPKv----dAPNEL 342 Deinococcus geo...
WP_012370617 224 FTALTITEPVPLHRQRFGAVLREileaY--AEDLYRYKGILHFSDT-DR-KTILQGTGMIYGTA-TRGEFeGp--KQTTL 296 Exiguobacterium...
Q5FRQ7       227 FVSLEWRREFPLDLTGFRAVIER----H--APVLLRAKGILYLATApKR-ALLLQMTGSRITIGrAPEKArSd--PDTRL 297 Gluconobacter o...
Q89DY4       214 FETLSWTSDHPISLPRLQQAIGR----L--APKLARAKGLFETVEQpGR-LTVFQFAGGRATLApGEAPTpGv--PRSRI 284 Bradyrhizobium ...
4IXM_A       298 VFIg---iQLP---EEEIRAAFAGLR 317 Escherichia coli K-12
Q2J3W5       289 VLVgv--gTCDlppPAVLDAILDRAL 312 Rhodopseudomonas palustris HaA2
Q7WC50       302 VFIatggrGVP---RFDAPSHFEQAL 324 Bordetella parapertussis
WP_011700407 601 TFIg---rTEEpdpFQTAEASIRAAE 623 Syntrophobacter fumaroxidans
WP_011699572 272 VFIg---rGLNt-fREAILAGLKGCE 293 Syntrophobacter fumaroxidans
4_pfamImport  70 VFIg---yHPS---RPRVAEQLRELT 89 
WP_011525698 343 IFIg---yHVS---RKKVTEALQKAL 362 Deinococcus geothermalis
WP_012370617 297 VFIg---kNLD---EQAIRKGVKAAR 316 Exiguobacterium artemiae
Q5FRQ7       298 VFIgr-kgMFD---PQALKDDLDAMR 319 Gluconobacter oxydans
Q89DY4       285 VFIae-lgVLS---KAELDGILAECV 306 Bradyrhizobium japonicum
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